Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0728
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   1.4  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    24   1.4  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   3.2  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   3.2  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   3.2  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   3.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.3  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   4.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   4.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.8  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   9.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.8  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +1

Query: 475 QVAGSMKLELARTVRSQLLPSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLLRN 642
           Q+   +K+E+ R    QL+ S       L  S S E C L+   +     PW  R+
Sbjct: 151 QLDALVKVEMTRVSLLQLIKS-------LRQSSSLEHCTLIGEDNISAKNPWFPRH 199


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 67  TLVVPWVNFSVIMANTPLLSTTICPNKP*PTVRCL 171
           T++VPW      +A T  L+T +        +RCL
Sbjct: 224 TMLVPWALMEQPLAQTKKLATIVGCGTDETMIRCL 258


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 67  TLVVPWVNFSVIMANTPLLSTTICPNKP*PTVRCL 171
           T++VPW      +A T  L+T +        ++CL
Sbjct: 224 TMLVPWALMEQPLAQTKKLATIVGCGTDGTMIKCL 258


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 67  TLVVPWVNFSVIMANTPLLSTTICPNKP*PTVRCL 171
           T++VPW      +A T  L+T +        ++CL
Sbjct: 224 TMLVPWALMEQPLAQTKKLATIVGCGTDGTMIKCL 258


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 67  TLVVPWVNFSVIMANTPLLSTTICPNKP*PTVRCL 171
           T++VPW      +A T  L+T +        ++CL
Sbjct: 224 TMLVPWALMEQPLAQTKKLATIVGCGTDETMIKCL 258


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 67  TLVVPWVNFSVIMANTPLLSTTICPNKP*PTVRCL 171
           T++VPW      +A T  L+T +        ++CL
Sbjct: 224 TMLVPWALMEQPLAQTKKLATIVGCGTDETMIKCL 258


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 352 RSRW*ECKLTHHRLGFQ*QVKQSGSHH 272
           + RW +C   +  LGF+ Q     S H
Sbjct: 667 KKRWSQCMYMYFLLGFRLQANDELSAH 693


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 352 RSRW*ECKLTHHRLGFQ*QVKQSGSHH 272
           + RW +C   +  LGF+ Q     S H
Sbjct: 667 KKRWSQCMYMYFLLGFRLQANDELSAH 693


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 547 SEPNWAKAATSRYEP 503
           S PNW+   T ++EP
Sbjct: 45  SRPNWSYLRTPQFEP 59


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 547 SEPNWAKAATSRYEP 503
           S PNW+   T ++EP
Sbjct: 65  SRPNWSYLRTPQFEP 79


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +2

Query: 134 FVQTSRSLPSDVSTAASSPRP*GYPGDVFYLHSRLLERAARCLTKW 271
           F  T+ SLP      A SP+    P +V  +    LER  R + ++
Sbjct: 252 FPFTAESLPDLTKYGAYSPKKVYAPEEVAEIVEYGLERGVRVIPEF 297


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 352 RSRW*ECKLTHHRLGFQ*QVKQSGSHH 272
           + RW +C   +  LGF+  V    S H
Sbjct: 120 KKRWSQCMYMYFLLGFRYLVNDELSAH 146


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 352 RSRW*ECKLTHHRLGFQ*QVKQSGSHH 272
           + RW +C   +  LGF+  V    S H
Sbjct: 434 KKRWSQCMYMYFLLGFRYLVNDELSAH 460


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,518
Number of Sequences: 336
Number of extensions: 3696
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)