Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0728
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 161 3e-40
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 161 3e-40
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 161 3e-40
Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical pr... 90 1e-18
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 42 3e-04
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 42 6e-04
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 34 0.087
AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trn... 31 1.1
AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trn... 31 1.1
U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fus... 29 3.3
EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell f... 29 3.3
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF016450-8|AAB65993.1| 578|Caenorhabditis elegans Hypothetical ... 29 4.3
AF077541-12|AAY55886.1| 207|Caenorhabditis elegans Hypothetical... 28 5.7
Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical pr... 27 9.9
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 161 bits (392), Expect = 3e-40
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +1
Query: 256 MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSV 435
M++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAINVGLSV
Sbjct: 313 MNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSV 372
Query: 436 SRVGSAAQTKAMKQVAGSMKLELAR 510
SRVGSAAQTKAMKQVAGSMKLELA+
Sbjct: 373 SRVGSAAQTKAMKQVAGSMKLELAQ 397
Score = 132 bits (319), Expect = 2e-31
Identities = 61/66 (92%), Positives = 65/66 (98%)
Frame = +3
Query: 3 NYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 182
+YTI+VSATASDAAPLQ+LAPYSGCAMGE FRDNGKHALII+DDLSKQAVAYRQMSLLLR
Sbjct: 228 DYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLR 287
Query: 183 RPPGRE 200
RPPGRE
Sbjct: 288 RPPGRE 293
Score = 122 bits (293), Expect = 3e-28
Identities = 56/69 (81%), Positives = 63/69 (91%)
Frame = +3
Query: 501 IGSYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHL 680
+ YREVAAFAQFGSDLDA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+L
Sbjct: 395 LAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYL 454
Query: 681 DKLDPSKIT 707
DK+DPS IT
Sbjct: 455 DKVDPSAIT 463
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 203 YPGDVFYLHSRLLERAAR 256
YPGDVFYLHSRLLERAA+
Sbjct: 295 YPGDVFYLHSRLLERAAK 312
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 161 bits (392), Expect = 3e-40
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +1
Query: 256 MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSV 435
M++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAINVGLSV
Sbjct: 305 MNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSV 364
Query: 436 SRVGSAAQTKAMKQVAGSMKLELAR 510
SRVGSAAQTKAMKQVAGSMKLELA+
Sbjct: 365 SRVGSAAQTKAMKQVAGSMKLELAQ 389
Score = 132 bits (319), Expect = 2e-31
Identities = 61/66 (92%), Positives = 65/66 (98%)
Frame = +3
Query: 3 NYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 182
+YTI+VSATASDAAPLQ+LAPYSGCAMGE FRDNGKHALII+DDLSKQAVAYRQMSLLLR
Sbjct: 220 DYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLR 279
Query: 183 RPPGRE 200
RPPGRE
Sbjct: 280 RPPGRE 285
Score = 122 bits (293), Expect = 3e-28
Identities = 56/69 (81%), Positives = 63/69 (91%)
Frame = +3
Query: 501 IGSYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHL 680
+ YREVAAFAQFGSDLDA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+L
Sbjct: 387 LAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYL 446
Query: 681 DKLDPSKIT 707
DK+DPS IT
Sbjct: 447 DKVDPSAIT 455
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 203 YPGDVFYLHSRLLERAAR 256
YPGDVFYLHSRLLERAA+
Sbjct: 287 YPGDVFYLHSRLLERAAK 304
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 161 bits (392), Expect = 3e-40
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +1
Query: 256 MSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSV 435
M++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG+RPAINVGLSV
Sbjct: 340 MNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSV 399
Query: 436 SRVGSAAQTKAMKQVAGSMKLELAR 510
SRVGSAAQTKAMKQVAGSMKLELA+
Sbjct: 400 SRVGSAAQTKAMKQVAGSMKLELAQ 424
Score = 132 bits (319), Expect = 2e-31
Identities = 61/66 (92%), Positives = 65/66 (98%)
Frame = +3
Query: 3 NYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 182
+YTI+VSATASDAAPLQ+LAPYSGCAMGE FRDNGKHALII+DDLSKQAVAYRQMSLLLR
Sbjct: 255 DYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALIIFDDLSKQAVAYRQMSLLLR 314
Query: 183 RPPGRE 200
RPPGRE
Sbjct: 315 RPPGRE 320
Score = 122 bits (293), Expect = 3e-28
Identities = 56/69 (81%), Positives = 63/69 (91%)
Frame = +3
Query: 501 IGSYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHL 680
+ YREVAAFAQFGSDLDA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+L
Sbjct: 422 LAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYL 481
Query: 681 DKLDPSKIT 707
DK+DPS IT
Sbjct: 482 DKVDPSAIT 490
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 203 YPGDVFYLHSRLLERAAR 256
YPGDVFYLHSRLLERAA+
Sbjct: 322 YPGDVFYLHSRLLERAAK 339
>Z82053-6|CAB04832.1| 106|Caenorhabditis elegans Hypothetical
protein T26E3.7 protein.
Length = 106
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/49 (81%), Positives = 47/49 (95%)
Frame = +3
Query: 3 NYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQA 149
+YTI+VSATASDAAPL++LAPYSGCA+GE F DNGKHALII+DDLSK+A
Sbjct: 2 DYTIVVSATASDAAPLKFLAPYSGCAIGEHFLDNGKHALIIFDDLSKKA 50
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +1
Query: 277 GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAA 456
GS+T +P++ D++ IP IT+GQI+++ +L + I P INV S+SR+ +A
Sbjct: 326 GSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSLSRLMKSA 385
Query: 457 QTKAM 471
+ M
Sbjct: 386 IGEGM 390
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 30 ASDAAPLQYLAPYSGCAMGEFFRDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGR 197
A+D + + P EF KH L++ D+S A A R++S PGR
Sbjct: 244 ANDPTIERIITPRIALTSAEFLAYQCKKHVLVVLTDMSSYAEALREVSAAREEVPGR 300
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/65 (33%), Positives = 39/65 (60%)
Frame = +1
Query: 277 GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAA 456
GS+T +P++ D++ IP IT+GQI+++ +L + I P I+V S+SR+ +A
Sbjct: 338 GSITQIPILTMPNNDITHPIPDLTGYITEGQIYIDKQLHKRLIYPPIDVLPSLSRLMKSA 397
Query: 457 QTKAM 471
+ M
Sbjct: 398 VGEGM 402
Score = 35.1 bits (77), Expect = 0.050
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 30 ASDAAPLQYLAPYSGCAMGEFFRDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGR 197
A+D + + P EFF + GKH L++ D+S A A R++S PGR
Sbjct: 256 ANDPTIERIITPRIALTAAEFFAYHCGKHVLVVLTDMSSYAEALREISAAREEVPGR 312
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 34.3 bits (75), Expect = 0.087
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 9 TIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRP 188
T +V+ T++ + + Y+G + E+FRD G + ++ D S+ A A R++S L
Sbjct: 298 TALVANTSNMPVAAREASIYTGITLAEYFRDMGLNVAMMADSTSRWAEALREISGRLGEM 357
Query: 189 P 191
P
Sbjct: 358 P 358
>AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform a protein.
Length = 909
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 626 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVRANSSFME 486
G L L+EE K S V + LC + R+ + K +L N+ +E
Sbjct: 649 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISLGNAYIVE 695
>AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform b protein.
Length = 908
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 626 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVRANSSFME 486
G L L+EE K S V + LC + R+ + K +L N+ +E
Sbjct: 648 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISLGNAYIVE 694
>U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fusion
failure protein1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 532 PSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 636
P +W HS CS EC L S D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522
>EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell
fusion failure-1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 532 PSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 636
P +W HS CS EC L S D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 435 IACRICCSDQGYEAGGRFHEAGIGSYREVAAFAQFGSDLDAATQQL 572
+A D GYE G +H G+G+ E + A G + + A+ L
Sbjct: 534 VATEAYSQDYGYEQQGDYHHEGVGATDENSTSAISGYEQNGASTSL 579
>AF016450-8|AAB65993.1| 578|Caenorhabditis elegans Hypothetical
protein B0238.7 protein.
Length = 578
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 48 LQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQM 167
+ Y Y C M + F+ NG+ L IYDD++K + Y+Q+
Sbjct: 526 MYYKIDYPTCEMSDNFQ-NGR--LRIYDDINKNSKKYQQI 562
>AF077541-12|AAY55886.1| 207|Caenorhabditis elegans Hypothetical
protein Y23H5A.8 protein.
Length = 207
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 502 LARTVRSQLLPSSVLTWMPLHSSCSTEECV-LLSSSSKDNMCPWLLRN 642
LA R +LP VLT + S +TEE L + S+D + WL N
Sbjct: 61 LADMARLNVLPVDVLTRVSAQDSIATEEAKGRLLNESRDVLSEWLDHN 108
>Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical
protein T25E12.5 protein.
Length = 300
Score = 27.5 bits (58), Expect = 9.9
Identities = 7/32 (21%), Positives = 18/32 (56%)
Frame = -1
Query: 114 RVCHYHGKIHPWHNQSKEPGIAGEQHRKRWQT 19
++ H+ G PW++ + G+ +H ++W +
Sbjct: 208 KIVHFIGAQKPWNSPPSDSGLHKNEHYQQWHS 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,037,767
Number of Sequences: 27780
Number of extensions: 362145
Number of successful extensions: 934
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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