Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0727
         (732 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    40   0.001
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    33   0.16 
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    33   0.28 
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    32   0.48 
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z92822-7|CAH10786.1|  601|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z83244-9|CAH10804.1|  601|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z83244-1|CAB05827.2|  634|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF145376-1|AAD39815.1|  634|Caenorhabditis elegans LIT-1 protein.      29   4.5  
Z99942-6|CAI79199.1|  119|Caenorhabditis elegans Hypothetical pr...    28   5.9  
AF024491-4|AAZ82855.1|  365|Caenorhabditis elegans Hypothetical ...    28   5.9  
AF024491-3|AAB70311.2|  420|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z35663-9|CAA84730.1|  219|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical...    28   7.8  
AC006656-3|AAF39882.1|  549|Caenorhabditis elegans Hypothetical ...    28   7.8  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 20/48 (41%), Positives = 28/48 (58%)
 Frame = +1

Query: 97  ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 240
           AR+V G+E   G FP+  +LR  N     + CGA+I+     +TAAHC
Sbjct: 25  ARVVGGFETVPGAFPWTAALR--NKATKAHHCGASILDKTHLITAAHC 70



 Score = 33.5 bits (73), Expect = 0.16
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 330 HPLYDESIQQIVQPHDIGLIKFGR-SLVFNDYVQPIRLQSSYHKDYNY-DGYRLTATGWG 503
           +PLY +     +  HDI +++     + FN+Y QPI L S   KD+ Y  G +   +GWG
Sbjct: 107 YPLYKD-----IFSHDIAILEIPYPGIEFNEYAQPICLPS---KDFVYTPGRQCVVSGWG 158

Query: 504 RTG 512
             G
Sbjct: 159 SMG 161


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
 Frame = +2

Query: 611 DSTICASGYNVTSQS---TCQGDSGGGL 685
           D  ICA+  NV++ S   TC GDSGGGL
Sbjct: 216 DDFICATSMNVSNYSAPRTCHGDSGGGL 243


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 100 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 240
           RI+ G   ++G   +   L      G    CGAT+I   W +TAAHC
Sbjct: 37  RIIGGNSIDDGA-NWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC 82


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 560 VTNAFCSEI-FVINNIVQDSTICASGYNVTSQSTCQGDSGGGL 685
           ++  FCS +   I  I   S +CA GY+     +CQGDSGG L
Sbjct: 204 LSTLFCSSLPNYIGRIHLPSMLCA-GYSYGKIDSCQGDSGGPL 245



 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/49 (30%), Positives = 31/49 (63%)
 Frame = +1

Query: 100 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTA 246
           R++ G E+    +P+  ++++++  G  + CG ++I  ++ LTAAHC A
Sbjct: 57  RLIGGSESSPHSWPW--TVQLLSRLGH-HRCGGSLIDPNFVLTAAHCFA 102


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +1

Query: 103 IVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 240
           I++G+ A         S+    P+G  N CG  +I     +T+AHC
Sbjct: 17  IINGFSANSFDTLSLASVITRFPDGTTNVCGGVLIAPSIVITSAHC 62


>Z92822-7|CAH10786.1|  601|Caenorhabditis elegans Hypothetical
           protein W06F12.1d protein.
          Length = 601

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +3

Query: 198 HHHPQRL--GTHGCSLHCYSRTIVIRAGTVNMTRPAVVFETTDYLNHPLYDESIQQI-VQ 368
           HHH Q L         H + + +V     V+ T PA V  TT Y  +    + +QQI  Q
Sbjct: 122 HHHLQNLVQQQQQQQAHHHHQQLVGEMALVSHTHPAAVGSTTCYEKNQQKQQQVQQIPTQ 181

Query: 369 P 371
           P
Sbjct: 182 P 182


>Z83244-9|CAH10804.1|  601|Caenorhabditis elegans Hypothetical
           protein W06F12.1d protein.
          Length = 601

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +3

Query: 198 HHHPQRL--GTHGCSLHCYSRTIVIRAGTVNMTRPAVVFETTDYLNHPLYDESIQQI-VQ 368
           HHH Q L         H + + +V     V+ T PA V  TT Y  +    + +QQI  Q
Sbjct: 122 HHHLQNLVQQQQQQQAHHHHQQLVGEMALVSHTHPAAVGSTTCYEKNQQKQQQVQQIPTQ 181

Query: 369 P 371
           P
Sbjct: 182 P 182


>Z83244-1|CAB05827.2|  634|Caenorhabditis elegans Hypothetical
           protein W06F12.1a protein.
          Length = 634

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +3

Query: 198 HHHPQRL--GTHGCSLHCYSRTIVIRAGTVNMTRPAVVFETTDYLNHPLYDESIQQI-VQ 368
           HHH Q L         H + + +V     V+ T PA V  TT Y  +    + +QQI  Q
Sbjct: 155 HHHLQNLVQQQQQQQAHHHHQQLVGEMALVSHTHPAAVGSTTCYEKNQQKQQQVQQIPTQ 214

Query: 369 P 371
           P
Sbjct: 215 P 215


>AF145376-1|AAD39815.1|  634|Caenorhabditis elegans LIT-1 protein.
          Length = 634

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +3

Query: 198 HHHPQRL--GTHGCSLHCYSRTIVIRAGTVNMTRPAVVFETTDYLNHPLYDESIQQI-VQ 368
           HHH Q L         H + + +V     V+ T PA V  TT Y  +    + +QQI  Q
Sbjct: 155 HHHLQNLVQQQQQQQAHHHHQQLVGEMALVSHTHPAAVGSTTCYEKNQQKQQQVQQIPTQ 214

Query: 369 P 371
           P
Sbjct: 215 P 215


>Z99942-6|CAI79199.1|  119|Caenorhabditis elegans Hypothetical
           protein H13N06.7 protein.
          Length = 119

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 302 CFRDDRLFKPPTLRRIDTADCTTSRHRPHQVWTL 403
           CF+  RL    + R  DT++C    + P + WTL
Sbjct: 52  CFKSSRLENVKSCREADTSNCAAPEY-PTRKWTL 84


>AF024491-4|AAZ82855.1|  365|Caenorhabditis elegans Hypothetical
           protein C24A1.2b protein.
          Length = 365

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -2

Query: 134 CPS-SASHPDTILAPALTFSTKVRAGSADTTATPAIATRSKTAHC 3
           CP+ SASHP+ +  P ++   +  A     TA P I++   T  C
Sbjct: 146 CPTTSASHPNLLTIPQISVQPQPTAPQTLLTAAPFISSTVFTPTC 190


>AF024491-3|AAB70311.2|  420|Caenorhabditis elegans Hypothetical
           protein C24A1.2a protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -2

Query: 134 CPS-SASHPDTILAPALTFSTKVRAGSADTTATPAIATRSKTAHC 3
           CP+ SASHP+ +  P ++   +  A     TA P I++   T  C
Sbjct: 201 CPTTSASHPNLLTIPQISVQPQPTAPQTLLTAAPFISSTVFTPTC 245


>Z35663-9|CAA84730.1|  219|Caenorhabditis elegans Hypothetical
           protein T04A8.11 protein.
          Length = 219

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 115 WEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTA 231
           ++AE+G+  Y+ + RM+   G V      +IH  +GL A
Sbjct: 32  YDAEKGEKKYKSTKRMIEARG-VEEVHTELIHEQYGLAA 69


>AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical
           protein Y102A5C.27 protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = +3

Query: 357 QIVQPHDIGLIKFGRSLVFNDYVQPIRL-QSSYHKDYNY---DGYRLTATGWGRTGPMVP 524
           Q VQ +++    FG    F++   P+   +S+YH D+NY   + YR+ ++     G  + 
Sbjct: 9   QAVQANNLNTDHFGTCGTFDNSRAPVTSHRSTYHNDHNYHYNNNYRIQSSDRSYAGKSLW 68

Query: 525 LL 530
           +L
Sbjct: 69  IL 70


>AC006656-3|AAF39882.1|  549|Caenorhabditis elegans Hypothetical
           protein H12I13.3 protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/21 (52%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = +3

Query: 306 FETTDY-LNHPLYDESIQQIV 365
           F+ +DY  NHPLYDES ++++
Sbjct: 450 FDFSDYPKNHPLYDESNKKVI 470


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,254,289
Number of Sequences: 27780
Number of extensions: 344798
Number of successful extensions: 881
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)