Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0726
(757 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.004
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 36 0.036
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 32 0.44
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.58
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 32 0.58
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.3
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.3
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 30 1.8
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.3
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 9.4
SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_36933| Best HMM Match : TNFR_c6 (HMM E-Value=0.93) 28 9.4
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 542 CAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 709
CAG R+G N D G P ++ L G VS+GK + Y V ++S+T+WI
Sbjct: 250 CAGEARSGASGGCNGDSGGPLVCEDNGRWYLHGAVSYGKLHCPTTYYTVFARVASYTDWI 309
Query: 710 LQ 715
Q
Sbjct: 310 KQ 311
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 35.9 bits (79), Expect = 0.036
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Frame = +2
Query: 506 QGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN-------ALVGIVSFGKSNANDI 664
Q + +T+N CAG+ R GG D D G P N LVG+ S+GK A +
Sbjct: 383 QSYGDRITENMLCAGM-RQGGVDSCQGDSGGPFVCTNPENPRQWTLVGVTSWGKGCARAL 441
Query: 665 YPVVLTSISSFTEWI 709
+ ++ + WI
Sbjct: 442 KYGIYANVRRYLHWI 456
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = +2
Query: 542 CAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 709
CAG R G N D G P + + L G VS+G Y V T +SS+ WI
Sbjct: 662 CAGEARVGAAGGCNGDSGGPLVCEQSGVWVLHGAVSYGARWCPTDYYTVFTRVSSYVAWI 721
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 542 CAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 709
CAG R+ N D G P ++ L G VS+G + V ++S+T+WI
Sbjct: 935 CAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHGAVSYGMKYCPTTHYTVFARVASYTDWI 994
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 542 CAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 709
CAG R+ N D G P ++ L G VS+G N + V ++S+T+WI
Sbjct: 605 CAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWI 664
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/87 (18%), Positives = 32/87 (36%)
Frame = +3
Query: 246 SLCVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTV 425
S + HP++++ D++++ + + F + GWG
Sbjct: 509 SQIIEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITGWGAIN 568
Query: 426 QGGSVSDGNLHKLELIVTNKENCREQY 506
S L + L + + ENCR +Y
Sbjct: 569 GDTQQSPDILQQAMLPIASHENCRRKY 595
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 70 EVFLPILNQW--FQQCAGIVLTNYHYLSTATCFH-GEFYDPAYRRIIAGSSRRSEPGEIS 240
E F+ + W QC+G ++ H ++ A C H G+++ I+ G S S E+
Sbjct: 138 EPFVSSVKLWSDVMQCSGTLIGPCHVITAAHCIHNGKWFVSPLTAILVGVSNTSSTDELD 197
Query: 241 Y 243
Y
Sbjct: 198 Y 198
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 31.9 bits (69), Expect = 0.58
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Frame = +2
Query: 515 DRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN------------ALVGIVSFGKSNAN 658
D +VT N FCAG + D D G P N L+G++S+G
Sbjct: 285 DYIVTANMFCAGFENSSRGDACQGDSGGPFSVDNPLPATPKGQHRHVLLGVISWGDGCGK 344
Query: 659 DIYPVVLTSISSFTEWILQNV 721
V T + +F +WIL +
Sbjct: 345 FGKYGVYTRLFNFIDWILNEI 365
Score = 29.9 bits (64), Expect = 2.3
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +3
Query: 261 HPEFSEENYDKDVSIVRVTHAIHF 332
HP +S ++YD D++++R+ + F
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTF 222
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +2
Query: 542 CAGLVRAGGRDYDNTDLGAPAFFQN----ALVGIVSFGKSNANDIYPVVLTSISSFTEWI 709
CAG + D G P + L G+VSFG N V T +S++ +WI
Sbjct: 115 CAGEAKPNAAGACQGDSGGPLVCERNGQWTLYGVVSFGAGNCEVTSYTVYTKVSNYLDWI 174
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/84 (21%), Positives = 33/84 (39%)
Frame = +3
Query: 255 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGG 434
++H +S D D +++++T ++F + GWG+T G
Sbjct: 375 ISHANYSYNTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRG 432
Query: 435 SVSDGNLHKLELIVTNKENCREQY 506
S S L ++ L + N C Y
Sbjct: 433 SPSPNYLQEVGLPLVNHSQCHATY 456
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -3
Query: 605 RQGHPSQYCRSRGHQPGPNRR--RICYQSRRD 516
RQG P +YCRS Q GP RR R Y +R+
Sbjct: 338 RQGTPDEYCRSSVKQIGPFRRFERRGYSKKRN 369
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/84 (21%), Positives = 33/84 (39%)
Frame = +3
Query: 255 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGG 434
++H +S D D +++++T ++F + GWG+T G
Sbjct: 624 ISHANYSYNTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRG 681
Query: 435 SVSDGNLHKLELIVTNKENCREQY 506
S S L ++ L + N C Y
Sbjct: 682 SPSPNYLQEVGLPLVNHSQCHATY 705
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -2
Query: 255 RKVNIRYFTGLTATGRSSDNATVCRIVEFSMETGSS*KVVVVGENNTSALLE 100
R +N FTG TGR AT +V+ +E GS ++V+ + + +E
Sbjct: 219 RGINALTFTGSLETGRKVAAATAVNLVKCQLEMGSKNALIVLDDADLDNAVE 270
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +2
Query: 524 VTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN----ALVGIVSFGKSNANDIYPVVLTSIS 691
V+ CA + G D D G P +N LVG+ S+G A+ YP + ++
Sbjct: 384 VSSTMLCA---QVPGIDTCQGDSGGPLVCENNNKWTLVGVTSWGYGCAHPDYPGIYAKLT 440
Query: 692 SFTEWILQNV 721
+W+ ++
Sbjct: 441 ELKDWVFHHM 450
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/79 (21%), Positives = 31/79 (39%)
Frame = +3
Query: 261 HPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSV 440
H +FS + D++++++ + + GWG TV GGS
Sbjct: 110 HEQFSMRHLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRTVGGGSA 169
Query: 441 SDGNLHKLELIVTNKENCR 497
+ G L + L V +C+
Sbjct: 170 A-GILQQAMLPVAGDSDCQ 187
>SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 671 RGRCHWHCSFQKIRCLLAHFGRRQGHPSQYCRSRGHQPGPNRRRICY 531
R CH F+++ LLA F R+ HP + R H P R++C+
Sbjct: 249 RQMCHPLAPFRQMCYLLAPFRRQMCHPLAHFRQMCHPLAP-FRQMCH 294
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/98 (19%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Frame = +3
Query: 258 NHPEF-SEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGG 434
NHP++ S + D++++R++ + GWGT GG
Sbjct: 709 NHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWGTLSSGG 768
Query: 435 SVSDGNLHKLELIVTNKENCREQYKVMIAS*LITNSAP 548
S + L++ + + + C Y I++ +I P
Sbjct: 769 SQPEA-LNQAVVPLRTRSECERSYPGKISADMICAGNP 805
>SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 473
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 55 SLVQIEVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFY 177
+LV +E + P N+W ++ +LT Y STA G+ Y
Sbjct: 111 NLVSMERYDPSTNEWEEEAVAPMLTARKYFSTAV-LDGKLY 150
>SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -3
Query: 458 VEVAVRYTAALNGSSPSEQI-NKNTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILVVI 282
+++ V Y AA+ S Q N+N L Y + D + A + M SY+ + +
Sbjct: 303 MKIKVNYVAAVQDESTYSQFYNENNLKYEEEFTDVLENIKTRARIVIMVTSYNMAVEGMH 362
Query: 281 LLREFGMVNAK 249
L + G++N +
Sbjct: 363 LAKNRGLINGE 373
>SB_36933| Best HMM Match : TNFR_c6 (HMM E-Value=0.93)
Length = 524
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 322 ACVTRTMLTSLS*FSSENSGWLTQSEHKIFHRAHCDG 212
AC T SLS S E W+ + K++ +H DG
Sbjct: 263 ACDTCNRYESLSKASEECKEWVNSEQFKLWETSHLDG 299
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,246,502
Number of Sequences: 59808
Number of extensions: 618116
Number of successful extensions: 1525
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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