Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0723
         (431 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0413 - 3028946-3031111                                           28   2.8  
07_03_1064 + 23700662-23700787,23701709-23701870,23701983-237021...    28   3.7  
10_08_0331 - 16831646-16834756                                         27   4.9  
01_06_0356 + 28662956-28664043,28664255-28665139,28665227-286658...    27   4.9  
10_08_0371 + 17265691-17265788,17265873-17265971,17266586-172666...    27   8.6  

>02_01_0413 - 3028946-3031111
          Length = 721

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = -3

Query: 207 LGVIHKKLPQISFVSLVRNSNSNLFAIFPMRVE-IRQFYLISIYYSNKGKLTGY*NIIKN 31
           +G I + +   S ++ +R S + L      ++E ++    IS+ Y+N   +T   +I+KN
Sbjct: 364 IGTIPESIYSCSNLTWLRLSTNKLHGELTKKIENLKSITFISLSYNNFKNITNTLHILKN 423

Query: 30  KRSTIFKLL 4
            R+    LL
Sbjct: 424 LRNLTVLLL 432


>07_03_1064 +
           23700662-23700787,23701709-23701870,23701983-23702101,
           23703128-23703202,23704387-23704480,23704856-23704915,
           23705083-23705151,23705457-23705555,23706201-23706245,
           23706339-23706441,23706665-23706723
          Length = 336

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/70 (24%), Positives = 36/70 (51%)
 Frame = -3

Query: 219 NTVKLGVIHKKLPQISFVSLVRNSNSNLFAIFPMRVEIRQFYLISIYYSNKGKLTGY*NI 40
           +TV +  +  K   +  ++L+R+S+ N        ++I  F++  ++ +NK K T   NI
Sbjct: 247 STVMMRYVSSKDNLMILMNLLRDSSKN--------IQIEAFHVFKLFAANKNKPTEVVNI 298

Query: 39  IKNKRSTIFK 10
           +   RS + +
Sbjct: 299 LVTNRSKLLR 308


>10_08_0331 - 16831646-16834756
          Length = 1036

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -3

Query: 204  GVIHKKLPQISFVSLVRNSNSNLFAIFPMRVEIRQFYLISIYYSNKGKLTGY 49
            GVI   +  I  +S++  SN+ L+   P   +++ F   SIY +N G L G+
Sbjct: 913  GVIPTTIANIPCLSVLNLSNNRLWGSIPTGRQLQTFVDPSIYSNNLG-LCGF 963


>01_06_0356 +
           28662956-28664043,28664255-28665139,28665227-28665840,
           28665929-28666338
          Length = 998

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = -3

Query: 267 IRCHATGTWSYNYIFVNTVKLGVIHKKLPQISFVSLVRNSNSNLFAIFPMRVE 109
           + C ++G W     F +    G I  ++  +SF+S +  SN+ L    P  ++
Sbjct: 63  VSCDSSGKWVTGLEFEDMALEGTISPQIGNLSFLSSLVLSNTTLIGPVPTELD 115


>10_08_0371 +
           17265691-17265788,17265873-17265971,17266586-17266628,
           17267250-17267321,17267400-17267495,17267609-17267842,
           17267914-17268097,17268247-17268358,17268447-17268533,
           17268703-17268841,17269628-17269718,17270045-17270154,
           17270309-17270413,17270982-17271055,17271379-17271454,
           17271786-17272022,17272419-17272490,17273082-17273153,
           17273240-17273304,17273306-17273383,17273384-17273486,
           17273769-17273858,17274873-17274980,17275063-17275113,
           17276126-17276203,17276284-17276346,17276944-17277140,
           17277243-17277312,17277640-17277828
          Length = 1030

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 240 TTCLLHDNEFTVTYNYGNVKVMRIKSNDSL 329
           TTC L DN    T NYG + ++   +++++
Sbjct: 329 TTCSLFDNLLKSTRNYGTINLLSALTSEAV 358


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,486,573
Number of Sequences: 37544
Number of extensions: 162186
Number of successful extensions: 265
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)