Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0722
         (777 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77669-5|CAK12563.1|  976|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z77669-4|CAB01242.1|  988|Caenorhabditis elegans Hypothetical pr...    40   0.002
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ...    36   0.032
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr...    28   6.5  

>Z77669-5|CAK12563.1|  976|Caenorhabditis elegans Hypothetical protein
            T07F10.1b protein.
          Length = 976

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +3

Query: 258  IPANMRPWVYCAGLRHGTAEDFNFFWNRYLQEDLSSEKVVMLNVAGCTTDQASLNR-FLD 434
            IPA  R   YC  +R+G ++ F   ++ Y  E    EK+ ++    C+ D  +L +  LD
Sbjct: 797  IPAPFRAESYCEAVRNGNSDTFEKVFHWYKTERNQVEKLNLMTALTCSKDILTLKKLLLD 856

Query: 435  AIVSGNDDIRPQDYNAALTSAITS 506
            A+       R QD  AAL + I+S
Sbjct: 857  AMKPEGSSFRLQDC-AALFAKISS 879


>Z77669-4|CAB01242.1|  988|Caenorhabditis elegans Hypothetical protein
            T07F10.1a protein.
          Length = 988

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +3

Query: 258  IPANMRPWVYCAGLRHGTAEDFNFFWNRYLQEDLSSEKVVMLNVAGCTTDQASLNR-FLD 434
            IPA  R   YC  +R+G ++ F   ++ Y  E    EK+ ++    C+ D  +L +  LD
Sbjct: 809  IPAPFRAESYCEAVRNGNSDTFEKVFHWYKTERNQVEKLNLMTALTCSKDILTLKKLLLD 868

Query: 435  AIVSGNDDIRPQDYNAALTSAITS 506
            A+       R QD  AAL + I+S
Sbjct: 869  AMKPEGSSFRLQDC-AALFAKISS 891


>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
           protein Y42A5A.1 protein.
          Length = 1045

 Score = 35.9 bits (79), Expect = 0.032
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 258 IPANMRPWVYCAGLRHGTAEDFNFFWNRYLQEDLSSE 368
           IP  +RP VY A +  GT EDF+F + +++ E    E
Sbjct: 865 IPYYLRPHVYSAAINDGTQEDFDFLYKKWMIEHYMME 901


>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical protein
            F21H12.6 protein.
          Length = 1374

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -2

Query: 440  NRIQESIQTGLVSSTASNVEHYHLLTGQIFLKVAIPEEVEVF 315
            NR+++ +Q  LV  T  NV+    L GQI L++  P E   F
Sbjct: 1119 NRVKQLMQAKLVDQTPENVQKIIELCGQI-LQITKPNETLQF 1159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,542,514
Number of Sequences: 27780
Number of extensions: 419923
Number of successful extensions: 1148
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)