Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0722
(777 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 3.2
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 23 3.2
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 4.2
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 4.2
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 4.2
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 4.2
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 5.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.5
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 7.3
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 7.3
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 3.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 751 NSLL*PDEVRPRGLDSS*RRAVCGSQ 674
N ++ P E RP+G++ CG Q
Sbjct: 216 NGIVSPQEERPKGINGRRASLFCGLQ 241
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 23.0 bits (47), Expect = 3.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 751 NSLL*PDEVRPRGLDSS*RRAVCGSQ 674
N ++ P E RP+G++ CG Q
Sbjct: 211 NGIVSPQEERPKGINGRRASLFCGLQ 236
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 207 NAITLEPRPSEVEHRYFIPANMRPWV 284
N I P P V + F+P M PW+
Sbjct: 113 NYIEQIPIPVPVYYGNFLPRPMGPWI 138
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 207 NAITLEPRPSEVEHRYFIPANMRPWV 284
N I P P V + F+P M PW+
Sbjct: 113 NYIEQIPIPVPVYYGNFLPRPMGPWI 138
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 207 NAITLEPRPSEVEHRYFIPANMRPWV 284
N I P P V + F+P M PW+
Sbjct: 113 NYIEQIPIPVPVYYGNFLPRPMGPWI 138
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 207 NAITLEPRPSEVEHRYFIPANMRPWV 284
N I P P V + F+P M PW+
Sbjct: 113 NYIEQIPIPVPVYYGNFLPRPMGPWI 138
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 678 EPHTAR-RYELSRPRGRTSSGHSREFQ 755
E T+R RY SR R + S + RE+Q
Sbjct: 31 EERTSRNRYSRSREREQNSYKNEREYQ 57
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 678 EPHTAR-RYELSRPRGRTSSGHSREFQ 755
E T+R RY SR R + S + RE+Q
Sbjct: 31 EERTSRNRYSRSREREQNSYKNEREYQ 57
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 678 EPHTAR-RYELSRPRGRTSSGHSREFQ 755
E T+R RY SR R + S + RE+Q
Sbjct: 31 EERTSRNRYSRSREREQNSYKNEREYQ 57
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 678 EPHTAR-RYELSRPRGRTSSGHSREFQ 755
E T+R RY SR R + S + RE+Q
Sbjct: 31 EERTSRNRYSRSREREQNSYKNEREYQ 57
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 678 EPHTAR-RYELSRPRGRTSSGHSREFQ 755
E T+R RY SR R + S + RE+Q
Sbjct: 31 EERTSRNRYSRSREREQNSYKNEREYQ 57
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 678 EPHTAR-RYELSRPRGRTSSGHSREFQ 755
E T+R RY SR R + S + RE+Q
Sbjct: 31 EERTSRNRYSRSREREQNSYKNEREYQ 57
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.5
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 678 EPHTAR-RYELSRPRGRTSSGHSREFQ 755
E T+R RY SR R + S + RE+Q
Sbjct: 31 EERTSRNRYSRSREREQNSYKNEREYQ 57
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = -2
Query: 284 HPRAHVSRDKVPVLHFGRPGFQSYCILRVPRYKGIPLRTFFEDQS 150
H RA D P F C++ P +PL T ED S
Sbjct: 410 HSRAASKEDLSPSSLADGARFGGSCLIHGPPLPPLPLHTECEDLS 454
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 5.5
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = -2
Query: 284 HPRAHVSRDKVPVLHFGRPGFQSYCILRVPRYKGIPLRTFFEDQS 150
H RA D P F C++ P +PL T ED S
Sbjct: 410 HSRAASKEDLSPSSLADGARFGGSCLIHGPPLPPLPLHTECEDLS 454
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 225 PRPSEVEHRYFIPANMRPWV 284
P P V + F+P M PW+
Sbjct: 116 PIPVPVYYGNFLPRPMGPWI 135
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2
Query: 200 VPRYKGIP 177
VPRYKG+P
Sbjct: 84 VPRYKGVP 91
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,694
Number of Sequences: 438
Number of extensions: 5640
Number of successful extensions: 36
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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