Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0721
         (719 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42439-5|AAA83509.2|  542|Caenorhabditis elegans Hypothetical pr...    28   5.8  
L23647-2|AAK29995.1|  773|Caenorhabditis elegans Hypothetical pr...    28   5.8  
L23647-1|AAL11102.1|  624|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF016449-3|AAG23997.2|  337|Caenorhabditis elegans Serpentine re...    28   5.8  

>U42439-5|AAA83509.2|  542|Caenorhabditis elegans Hypothetical
           protein F19C7.4 protein.
          Length = 542

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -1

Query: 281 IYLPFKPSLTSTNNSRPKLAKSVQQFS---SFSETNEQKFIFIYIDR*IGRFDYINEH 117
           I + F+  +T   N     A   QQF+   SF ETN  K +  +     G F  IN++
Sbjct: 240 IKVAFQKLITKAYNGSDSRALLKQQFNLCDSFDETNLSKAVQFFFQNVYGYFQIINQY 297


>L23647-2|AAK29995.1|  773|Caenorhabditis elegans Hypothetical
           protein ZC262.3a protein.
          Length = 773

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 550 NHSKNALSSGYTIEYKVSRFEIKFN*LIT*HKFCDWSVQNEKKIMTL 690
           N S+N L+S   I  K++  +I FN L     F DW   N + +  +
Sbjct: 193 NVSRNRLTSFENISTKLTDLDISFNKLSLWPSFDDWKFPNLRSLSAI 239


>L23647-1|AAL11102.1|  624|Caenorhabditis elegans Hypothetical
           protein ZC262.3b protein.
          Length = 624

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 550 NHSKNALSSGYTIEYKVSRFEIKFN*LIT*HKFCDWSVQNEKKIMTL 690
           N S+N L+S   I  K++  +I FN L     F DW   N + +  +
Sbjct: 193 NVSRNRLTSFENISTKLTDLDISFNKLSLWPSFDDWKFPNLRSLSAI 239


>AF016449-3|AAG23997.2|  337|Caenorhabditis elegans Serpentine
           receptor, class t protein15 protein.
          Length = 337

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 286 KCSELNKNYNFVFFFDASSVGRIAFVCFKFILY 384
           + S+LN    F   FD   +  +  VCF ++ Y
Sbjct: 148 RVSDLNSTNTFKKSFDGGKINYVLLVCFAYVFY 180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,473,350
Number of Sequences: 27780
Number of extensions: 279298
Number of successful extensions: 545
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)