Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0720
         (613 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038118-1|AAH38118.1|  647|Homo sapiens TMC5 protein protein.         30   7.4  
BC027602-1|AAH27602.1|  760|Homo sapiens transmembrane channel-l...    30   7.4  
AY358155-1|AAQ88522.1|  948|Homo sapiens SAYY8238 protein.             30   7.4  
AY263164-1|AAP78779.1|  760|Homo sapiens TMC5 protein protein.         30   7.4  
AY236494-1|AAP69872.1|  760|Homo sapiens transmembrane channel-l...    30   7.4  

>BC038118-1|AAH38118.1|  647|Homo sapiens TMC5 protein protein.
          Length = 647

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -2

Query: 237 NTLSISDRRI*DIQCTQINSITNWRSGIE*IIGIFENSLVSMFQMI-FLMNTTIINFIYV 61
           N++S + RR  +     +NSI+ W+  ++ I G F  S++S F  + +L+   I +FI  
Sbjct: 49  NSISRAYRRSKNSLSEILNSISLWQKTLKIIGGKFGTSVLSYFNFLRWLLKFNIFSFILN 108

Query: 60  ILFI 49
             FI
Sbjct: 109 FSFI 112


>BC027602-1|AAH27602.1|  760|Homo sapiens transmembrane channel-like
           5 protein.
          Length = 760

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -2

Query: 237 NTLSISDRRI*DIQCTQINSITNWRSGIE*IIGIFENSLVSMFQMI-FLMNTTIINFIYV 61
           N++S + RR  +     +NSI+ W+  ++ I G F  S++S F  + +L+   I +FI  
Sbjct: 162 NSISRAYRRSKNSLSEILNSISLWQKTLKIIGGKFGTSVLSYFNFLRWLLKFNIFSFILN 221

Query: 60  ILFI 49
             FI
Sbjct: 222 FSFI 225


>AY358155-1|AAQ88522.1|  948|Homo sapiens SAYY8238 protein.
          Length = 948

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -2

Query: 237 NTLSISDRRI*DIQCTQINSITNWRSGIE*IIGIFENSLVSMFQMI-FLMNTTIINFIYV 61
           N++S + RR  +     +NSI+ W+  ++ I G F  S++S F  + +L+   I +FI  
Sbjct: 408 NSISRAYRRSKNSLSEILNSISLWQKTLKIIGGKFGTSVLSYFNFLRWLLKFNIFSFILN 467

Query: 60  ILFI 49
             FI
Sbjct: 468 FSFI 471


>AY263164-1|AAP78779.1|  760|Homo sapiens TMC5 protein protein.
          Length = 760

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -2

Query: 237 NTLSISDRRI*DIQCTQINSITNWRSGIE*IIGIFENSLVSMFQMI-FLMNTTIINFIYV 61
           N++S + RR  +     +NSI+ W+  ++ I G F  S++S F  + +L+   I +FI  
Sbjct: 162 NSISRAYRRSKNSLSEILNSISLWQKTLKIIGGKFGTSVLSYFNFLRWLLKFNIFSFILN 221

Query: 60  ILFI 49
             FI
Sbjct: 222 FSFI 225


>AY236494-1|AAP69872.1|  760|Homo sapiens transmembrane channel-like
           protein 5 protein.
          Length = 760

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -2

Query: 237 NTLSISDRRI*DIQCTQINSITNWRSGIE*IIGIFENSLVSMFQMI-FLMNTTIINFIYV 61
           N++S + RR  +     +NSI+ W+  ++ I G F  S++S F  + +L+   I +FI  
Sbjct: 162 NSISRAYRRSKNSLSEILNSISLWQKTLKIIGGKFGTSVLSYFNFLRWLLKFNIFSFILN 221

Query: 60  ILFI 49
             FI
Sbjct: 222 FSFI 225


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,537,205
Number of Sequences: 237096
Number of extensions: 1070011
Number of successful extensions: 1091
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)