SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0718
         (703 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863...    33   0.17 
07_01_0395 + 2985513-2986018,2986227-2986268,2986494-2986521           31   0.67 
12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550...    31   1.2  
12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444...    31   1.2  
12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051...    31   1.2  
10_08_0848 + 21035446-21035461,21035742-21036233,21036400-210369...    31   1.2  
10_01_0044 - 583349-584044                                             31   1.2  
05_03_0187 + 9413575-9414895,9415014-9415289,9415513-9415631,941...    31   1.2  
05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990,795...    31   1.2  
01_06_0544 + 30118208-30118417,30118959-30119063,30119179-301192...    31   1.2  
01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833...    31   1.2  
09_04_0637 - 19153136-19153513,19153607-19153759,19153857-191546...    30   1.5  
02_05_0313 - 27795152-27795268,27795476-27795515,27795773-277958...    30   1.5  
02_02_0402 - 9852407-9853519                                           30   1.5  
11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460           30   2.0  
01_05_0711 - 24495399-24495595,24495733-24495826,24495906-244959...    30   2.0  
01_01_0210 - 1801335-1802138                                           30   2.0  
09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254     29   2.7  
02_04_0199 - 20861793-20862023,20862588-20862798,20863260-208641...    29   2.7  
04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334     29   3.6  
01_01_0161 - 1385408-1385566,1385815-1385943,1386164-1386322,138...    29   3.6  
02_05_1336 + 35773629-35773856,35773931-35774085,35774217-357745...    29   4.7  
12_02_1175 + 26702744-26704507                                         28   6.2  
09_06_0081 + 20745627-20748144,20748211-20748308                       28   6.2  
06_01_1023 - 7996240-7996369,7997166-7997260,7997430-7997515,799...    28   6.2  
02_04_0426 - 22802143-22802667,22804929-22805129                       28   6.2  
01_01_0656 + 5013609-5014256                                           28   6.2  
10_06_0012 - 9586478-9588880                                           28   8.3  
08_02_0258 + 14968858-14970648                                         28   8.3  
07_01_0862 - 7172083-7172931                                           28   8.3  
07_01_0798 - 6271261-6271725                                           28   8.3  
07_01_0452 - 3418572-3418763,3419140-3419223                           28   8.3  

>01_03_0117 +
           12684729-12685886,12685978-12686145,12686292-12686336,
           12686438-12687280
          Length = 737

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
 Frame = -1

Query: 436 PRRPPSVWIAST*APALRFRAWLLPPHLGPAGSKP----VTLLGLPPACRPALPTTCAP 272
           P +PP   ++   AP  R RA    P L P    P         +PPA RPALP T AP
Sbjct: 110 PVKPPEE-LSPVGAPRSRVRAMPPSPSLSPPAKAPSHSHAKTPSMPPAERPALPPTKAP 167



 Score = 29.5 bits (63), Expect = 2.7
 Identities = 30/88 (34%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = -1

Query: 529 STVRAGTTLQPGWGFLPPLG*KSP*AMRSKIPRRPPSVWIA--ST*APALRFRAWLLPPH 356
           S VRA   + P     PP   K+P    +K P  PP+   A   T APA    A   PP 
Sbjct: 125 SRVRA---MPPSPSLSPPA--KAPSHSHAKTPSMPPAERPALPPTKAPAAISPA--TPPQ 177

Query: 355 LGPAGSKPVTLLGLPPACRPALPTTCAP 272
           L PA +        PP+  PA P   +P
Sbjct: 178 LSPANAHSTHHHAKPPSLPPAEPPVPSP 205


>07_01_0395 + 2985513-2986018,2986227-2986268,2986494-2986521
          Length = 191

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
 Frame = +3

Query: 213 LAHQQRRRQLGSSPLIGFSLGAHVVGNAGRQAGGRPNRVT----GLDPAGPRWGGNNQAL 380
           ++ +Q+ R  G   ++G   G    G+  R+ GG  + V     G+DPAG   GG+ +  
Sbjct: 47  VSSRQQWRPRGDKSIVGGLRGG---GSVARELGGVGSVVGFVGGGVDPAGCARGGHPRTA 103

Query: 381 NRNAGAYVEAIHTDGGLLGIFDRIAHGD 464
            R  G+   A  T   LL I   +A GD
Sbjct: 104 RRRPGSGAAAAAT-RPLLPILPMLARGD 130


>12_02_0642 +
           21454142-21454251,21454683-21454872,21454988-21455069,
           21455224-21455802,21455854-21456909,21457133-21457251,
           21457369-21457812
          Length = 859

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 27  CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 131
           C+CP + ++  LRC++ D    AG  R++ +  G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191


>12_02_0639 +
           21443480-21443589,21444022-21444211,21444327-21444408,
           21444563-21445054,21445221-21446246,21446470-21446588,
           21446706-21447149
          Length = 820

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 27  CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 131
           C+CP + ++  LRC++ D    AG  R++ +  G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191


>12_02_0633 +
           21402847-21402862,21403143-21404975,21405052-21405170,
           21405288-21405722
          Length = 800

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 27  CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 131
           C+CP + ++  LRC++ D    AG  R++ +  G+
Sbjct: 35  CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69


>10_08_0848 +
           21035446-21035461,21035742-21036233,21036400-21036956,
           21037084-21037539,21037886-21038302
          Length = 645

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 27  CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 131
           C+CP + ++  LRC++ D    AG  R++ +  G+
Sbjct: 35  CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69


>10_01_0044 - 583349-584044
          Length = 231

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -2

Query: 231 SVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQQGGADH--GVH 67
           +VV +   +V  ++  TG+S DG +   +G +    N     G  Q+   DH  GVH
Sbjct: 71  TVVQKYQVRVVADVPGTGSSKDGEMKQALGGSAQPSNKGATNGSAQENQGDHSQGVH 127


>05_03_0187 +
           9413575-9414895,9415014-9415289,9415513-9415631,
           9415749-9416192
          Length = 719

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 27  CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 131
           C+CP + ++  LRC++ D    AG  R++ +  G+
Sbjct: 39  CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 73


>05_03_0065 -
           7953414-7953845,7953963-7954081,7954158-7955990,
           7957103-7957559
          Length = 946

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 27  CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 131
           C+CP + ++  LRC++ D    AG  R++ +  G+
Sbjct: 182 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 216


>01_06_0544 +
           30118208-30118417,30118959-30119063,30119179-30119260,
           30119415-30121250,30121327-30121445,30121563-30122006
          Length = 931

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 27  CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 131
           C+CP + ++  LRC++ D    AG  R++ +  G+
Sbjct: 162 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 196


>01_04_0076 +
           15780981-15780996,15781277-15783109,15783186-15783304,
           15783422-15783724
          Length = 756

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 27  CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 131
           C+CP + ++  LRC++ D    AG  R++ +  G+
Sbjct: 35  CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69


>09_04_0637 -
           19153136-19153513,19153607-19153759,19153857-19154675,
           19155068-19155174,19155434-19155548
          Length = 523

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
 Frame = -3

Query: 416 VDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQWTRPQL 237
           ++CL++  C  VQ +    P   S   +GN V  +   SS V +     +    + R  L
Sbjct: 271 LNCLNVLECKRVQVIESKAPNLSSFSFSGNKVKLSLVESSQVKNLYMCSSNIICYARSDL 330

Query: 236 PPPLLMSQTKKLPRNCPTLGTPL--TAVLY 153
           P  +   +T  +  +C  + TP+  T +LY
Sbjct: 331 PSIVPNVETLAVASHCEMVDTPMLPTKLLY 360


>02_05_0313 -
           27795152-27795268,27795476-27795515,27795773-27795873,
           27796862-27796921,27797185-27797294,27797911-27798033,
           27798148-27798271,27798585-27798642,27798713-27798841,
           27799602-27799762
          Length = 340

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = -3

Query: 356 PGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQWTRPQLPPPLLMSQTKKLP 198
           P P +     P  +  + SSS+  N    A  + WT   +PP +  S  K +P
Sbjct: 149 PYPQKASKNEPGYTIKADSSSMLRNSGMNATVSSWTHNSIPPIVASSMVKVMP 201


>02_02_0402 - 9852407-9853519
          Length = 370

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = -3

Query: 398 SSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQWTRPQLPPP 228
           SS V   GL +  PP  +   T +   ++   SSS   + R +    Q  +  LPPP
Sbjct: 133 SSAVAADGLKLKPPPEAAATATSSKKRNSGPESSSTASSKRPKTVHRQQNKSPLPPP 189


>11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460
          Length = 515

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 288 GNAGRQAGGRPNRVTGLDPAGPRWGGNNQALNRNAG 395
           G  G+  GG+PN   G     P  GGN+ A  +  G
Sbjct: 302 GGGGKNGGGQPNNAKG-GGGAPNGGGNHPAQGKKGG 336


>01_05_0711 -
           24495399-24495595,24495733-24495826,24495906-24495986,
           24496130-24496178,24496281-24496366,24496452-24496679,
           24496797-24496835,24496911-24497000,24497093-24497155,
           24497233-24497302,24497400-24497446,24497544-24497606,
           24497702-24497752,24497851-24497934,24498075-24498139,
           24498243-24498299,24498409-24498526,24498624-24498674,
           24499100-24499186,24499272-24499351,24500663-24500780
          Length = 605

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 393 GAYVEAIHTDGGLLGIFDRIAHGDFYPNG 479
           GAY   +H +G    + + +++G +YPNG
Sbjct: 572 GAYTSTVHQNGHAKKLANGLSNGTYYPNG 600


>01_01_0210 - 1801335-1802138
          Length = 267

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 43/163 (26%), Positives = 59/163 (36%), Gaps = 5/163 (3%)
 Frame = +3

Query: 216 AHQQRRRQLGSSPLIGFSLGAHVVGNAGRQAGGRPN-RVTGLDPAGPRWGGNNQALNRNA 392
           AH++ R+QL  + L   +  A  V         R N  V+   P     GG         
Sbjct: 91  AHKKERQQLKRAQLQAAAAAAGRVAGGAAALYPRANPMVSAFAPTPHLLGGGEAGPTSWV 150

Query: 393 GAYVEAIHTDGGLLGIFDRIAHGDFYPNGGRNPQPGCRVVPALTVEPTNCTPPLFVTIVS 572
                A    GG  G    ++HG  +P  G  P       PA+    T  T    V   S
Sbjct: 151 YFSPRAAAVAGGAQGQQFHVSHGCVFPARGAGPAAVAAASPAV-FSYTPATSAAAVAAAS 209

Query: 573 LADYVTT----SIRLRTISALEVPSTWVMPYLVSAETESTDSE 689
            A YVTT      R+   SA  + + +  P +V AE  +T  E
Sbjct: 210 -APYVTTDEHHGRRIHASSAASL-ARYPGPAMVVAEPVATVPE 250


>09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254
          Length = 425

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 29/100 (29%), Positives = 37/100 (37%), Gaps = 1/100 (1%)
 Frame = -3

Query: 350 PSRIQTGNPVGSATSLSSSVTDNVRAQAEANQWTRPQLPPPLLMSQTKKLPRNCPTLGTP 171
           PS I T NP       ++SV  N  A   A        PPP  +  T  +PRN  T    
Sbjct: 155 PSIIVTANPPPRNVVSTTSVPQNSIAAKLACSSVAAASPPPRNLVSTTPVPRNSITANLA 214

Query: 170 LTAV-LYRPLARPRQSTTITLQSETASKAGRIMVFTAEFP 54
            ++V    P  R   STT    +  A+      V  A  P
Sbjct: 215 SSSVAAASPPPRNLVSTTPVPHNSIAANLASSSVAAASPP 254


>02_04_0199 -
           20861793-20862023,20862588-20862798,20863260-20864142,
           20864363-20865608
          Length = 856

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -3

Query: 248 RPQLPP-PLLMSQTKKLPRNCPTLGTPLTAVLYR--PLARPR 132
           RP LPP P L+S T   P   P +GTP +    R  P AR R
Sbjct: 467 RPPLPPSPPLLSSTTATPPPTPPVGTPKSEAADRRPPPARRR 508


>04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334
          Length = 554

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
 Frame = +2

Query: 104 PTATLLLWT--GVVLPTVYTTLPSMEFPV---SDSSLAT----FWSGSSTTEAAIGVESI 256
           P +T+L+WT  G ++  VYTT+P    P+   +++++AT      S  + TEA  G+ + 
Sbjct: 19  PASTMLVWTQVGEIVFPVYTTMPISTCPLMTGNENAVATNRDDSMSKDTPTEAKNGISTT 78

Query: 257 DWLQ 268
             L+
Sbjct: 79  SELE 82


>01_01_0161 -
           1385408-1385566,1385815-1385943,1386164-1386322,
           1387228-1387571,1387641-1387905,1387998-1388075,
           1388207-1388260,1389341-1389361,1389453-1389578,
           1389696-1389863,1389923-1390313,1390629-1390710,
           1391175-1391536,1391806-1392630,1392956-1393476
          Length = 1227

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 134 VVLPTVYTTLPSMEFPVSDSSLATFWSGSSTTEAAIGVES 253
           VV PT YT   S E+P    ++ T+W     + A + V+S
Sbjct: 796 VVDPTAYTIGRSAEWPEDGPTMGTYWCRRGRSYAHVQVDS 835


>02_05_1336 +
           35773629-35773856,35773931-35774085,35774217-35774549,
           35774615-35774927,35776992-35777168,35777281-35777397,
           35777532-35777698,35777800-35778024,35778127-35778448,
           35778542-35778786,35778993-35779131,35779212-35779304,
           35779509-35779577
          Length = 860

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 36  PRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGLAWSCQRSIQHCRQWS 176
           P L +Q     E  +P R+  R + ++ C  L W+   S+Q   +WS
Sbjct: 812 PTLGEQPAQPTESAEPNRIIPRPKERQDCNQLTWTTAPSLQFLNRWS 858


>12_02_1175 + 26702744-26704507
          Length = 587

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 236 PPPLLMSQTKKLPRNCP-TLGTPLTAVLYRPLARPRQSTTITLQSETASK 90
           PPPL +S + K P + P T    L  +L+ PL  PR+ T   + +   SK
Sbjct: 313 PPPLPVSSSSK-PTSAPRTFARRLVDLLHSPLYLPRRLTIPDIAAHRWSK 361


>09_06_0081 + 20745627-20748144,20748211-20748308
          Length = 871

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 21/61 (34%), Positives = 26/61 (42%)
 Frame = -1

Query: 454 AMRSKIPRRPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPACRPALPTTCA 275
           A  S    R P+  +A    P LR    L PP   P      T + +PPA  P +PT  A
Sbjct: 155 ASSSSAMPRAPTASLALRAPPHLRAPCGLAPPV--PTPPALATHVPMPPAPAPPVPTPPA 212

Query: 274 P 272
           P
Sbjct: 213 P 213


>06_01_1023 -
           7996240-7996369,7997166-7997260,7997430-7997515,
           7998034-7998184
          Length = 153

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +3

Query: 303 QAGGRPNRVTGLDPAGPRWGGNNQALNRNAGAYV 404
           +AG R  R  G DP  P WGG  +      G  V
Sbjct: 8   EAGRRRRRGGGSDPPSPMWGGGRRRAVSRRGKLV 41


>02_04_0426 - 22802143-22802667,22804929-22805129
          Length = 241

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 331 VTLLGLPPACRPALPTTCAPKLKPINGLDP 242
           V  L LPP+C+  LPT+ +P + P+  L P
Sbjct: 26  VAPLLLPPSCQARLPTS-SPVMPPVTPLSP 54


>01_01_0656 + 5013609-5014256
          Length = 215

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -1

Query: 364 PPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKPINGLDPNCRL 230
           PP    A S P+ L+  PPA    LP    P   P+  +DP+ RL
Sbjct: 104 PPPTTTASSAPLPLM--PPAVAYELPFLPPPPPLPLAAVDPDRRL 146


>10_06_0012 - 9586478-9588880
          Length = 800

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +1

Query: 43  WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 171
           W++NG + V     P L   SD N++++D +   N +++T VN
Sbjct: 78  WSANGENPVVDPASPELAISSDGNMVILD-QVTKNIIWSTHVN 119


>08_02_0258 + 14968858-14970648
          Length = 596

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 474 NGGRNPQPGCRVVPALTVEPTNCTPP 551
           +G R P P CR   A+++EP N TPP
Sbjct: 536 HGHRVPAPPCR--RAVSMEPCNLTPP 559


>07_01_0862 - 7172083-7172931
          Length = 282

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -1

Query: 370 LLPPHLGPAGSKPVTLLGLPPACRPAL-PTTCAPKLKPI 257
           L PP L P     +  L LPP  +P L P    PK KP+
Sbjct: 145 LFPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPL 183


>07_01_0798 - 6271261-6271725
          Length = 154

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = -1

Query: 613 IVLSLIEVVT*SANETIVTNSGGVQFVGSTVRAGTTLQPGWGFLP 479
           + ++L+ ++       +   +GG ++ G   RA    +PG G +P
Sbjct: 13  VAVALVALMVVVVGAVVAAAAGGEEYYGGVARAADGCEPGQGVVP 57


>07_01_0452 - 3418572-3418763,3419140-3419223
          Length = 91

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -3

Query: 206 KLPRNCPTLGTPL---TAVLYRPLARPRQSTTITLQSET 99
           KL  NCPT G P    T  L +PL   R + T  L S T
Sbjct: 42  KLKINCPTTGLPSVDHTNHLIKPLGCARDANTTALYSTT 80


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,715,101
Number of Sequences: 37544
Number of extensions: 679908
Number of successful extensions: 2521
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2516
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -