Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0717
(843 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 62 4e-10
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 55 6e-08
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 55 8e-08
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 52 8e-07
SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29) 31 0.89
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_7758| Best HMM Match : F5_F8_type_C (HMM E-Value=7.8e-26) 29 4.7
SB_15581| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-11) 29 4.7
SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_7284| Best HMM Match : F5_F8_type_C (HMM E-Value=7.3e-10) 28 8.2
SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38) 28 8.2
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 62.5 bits (145), Expect = 4e-10
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Frame = +3
Query: 261 IVKDAFLRSGNYNVIVVDWSSFS--LSTYSTAVMAVTGVGSSIATFLKNLK----LPLNK 422
+++D L+ NVI VDW S + L+ Y A VG+ +A + ++ L +
Sbjct: 43 VMRDELLKREPMNVITVDWQSGADGLNLYHVAAGNTRVVGAQLAELITTIQRVFDFDLRR 102
Query: 423 VHIVGFNLGAHVAGVTGRNLEGKVARIT 506
VH++G +LGAHVAG G L GKV RIT
Sbjct: 103 VHLIGHSLGAHVAGYAGERLSGKVGRIT 130
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 56.8 bits (131), Expect = 2e-08
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 10/98 (10%)
Frame = +2
Query: 476 KFGRQSSKNYGLDPSARDWEN-NV-LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHIDF 649
K G++ ++ GLDP++ + N +V +RL +DA +V+V+HTD ++ G GHIDF
Sbjct: 710 KTGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTD---MDLAGTPTVSGHIDF 766
Query: 650 FVNGRLVQPGCTNNL--------CSHNRAYEVFAATIT 739
+ NG QPGC + L C H RA E +A ++T
Sbjct: 767 YPNGGKKQPGCRDLLDGPINYVICDHMRAPEYYAESVT 804
Score = 48.8 bits (111), Expect = 5e-06
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Frame = +3
Query: 264 VKDAFLRSGNYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLKLPLNKV----HI 431
++ A ++ + NVI DWS + Y A VG+ I +K L ++
Sbjct: 632 IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYL 691
Query: 432 VGFNLGAHVAGVTGRNLE---GKVARITG 509
VGF+LGAH++G GR + K+ RITG
Sbjct: 692 VGFSLGAHISGYVGRRIAKTGQKLNRITG 720
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 55.2 bits (127), Expect = 6e-08
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Frame = +2
Query: 473 KKFGRQSSKNYGLDPSARDW---ENNVLRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHI 643
KK GR + LDP+A W + +RL T+DA +V+VIHT G+ IGH
Sbjct: 211 KKRGRMIDRITALDPAAM-WFHKHHEDVRLDTSDALFVDVIHTSAD----YGITSTIGHA 265
Query: 644 DFFVNGRLVQPGCTN--------NLCSHNRAYEVFAATI 736
DF+ NG QPGC N C H RA +F ++
Sbjct: 266 DFYPNGGKKQPGCDNFFRGFSSYLFCGHKRAPALFTTSL 304
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Frame = +3
Query: 264 VKDAFLRSGNYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVHI 431
+K+ L G++NVI+VDW + ++ AV VG+ A L+ L+ L VH+
Sbjct: 134 MKNELLWEGDFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHV 193
Query: 432 VGFNLGAHVAGVTGRNLE 485
+GF+ GAHVAG GR ++
Sbjct: 194 IGFSFGAHVAGYVGRRMK 211
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 54.8 bits (126), Expect = 8e-08
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Frame = +3
Query: 264 VKDAFLRSGNYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKN-LKLPLNK----VH 428
+KD LR + NVI+VDW + Y AV VG+ +A F+K L L ++ H
Sbjct: 115 MKDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFH 174
Query: 429 IVGFNLGAHVAGVTGRNLE--GK-VARITG 509
+GF+LGAH++G G+ L+ G+ + RITG
Sbjct: 175 SIGFSLGAHISGYVGQRLKRIGRHLDRITG 204
Score = 45.2 bits (102), Expect = 7e-05
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +2
Query: 473 KKFGRQSSKNYGLDPSARDWENNV--LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHID 646
K+ GR + GLDP+ ++ +RL DAQ+V+VIHT G+ GH+D
Sbjct: 193 KRIGRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHTS----YVFGITAPHGHMD 248
Query: 647 FFVNGRLVQPGCT 685
F+ NG Q GC+
Sbjct: 249 FYPNGGTSQRGCS 261
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 51.6 bits (118), Expect = 8e-07
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Frame = +2
Query: 509 LDPSARDWENNVL--RLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHIDFFVNGRLVQPGC 682
LDP+ + N + RL +DA++V+V+HTD ++ G GHIDF+ NG QPGC
Sbjct: 2 LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTD---MDFAGTSTQSGHIDFYPNGGKNQPGC 58
Query: 683 -------TNNL-CSHNRAYEVFAATIT 739
+N L C H RA++ F +IT
Sbjct: 59 RDIADGPSNALKCDHVRAHDYFTESIT 85
>SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29)
Length = 334
Score = 31.5 bits (68), Expect = 0.89
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +3
Query: 222 TRSQWHCYDDDNPIVKDAFLRSGNYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKN 401
T QW Y D+N ++K + S Y++ W S+ V+ V S T +KN
Sbjct: 245 TGDQWQSYQDENGMIKVRHMYSVKYSLTGDQWQSYQ---DGNGVIKVCPGNSDQTTVVKN 301
Query: 402 LKLPLNKVHIV 434
P+ K V
Sbjct: 302 EFSPVIKARYV 312
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +3
Query: 429 IVGFNLGAHVAGVTG---RNLEG-KVARITG 509
++GF+LG HVAG G +N G K+ RI+G
Sbjct: 21 VIGFSLGGHVAGYAGSRIKNTTGLKLGRISG 51
>SB_7758| Best HMM Match : F5_F8_type_C (HMM E-Value=7.8e-26)
Length = 423
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 207 YCRNNTRSQWHCYDDDNPIVKDAFLRSGNYNVIVVDWSSF 326
YC T +QW Y D N ++K + S Y++ W S+
Sbjct: 141 YCL--TGNQWQSYPDGNGVIKVRHMYSVKYSLTGDQWQSY 178
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 207 YCRNNTRSQWHCYDDDNPIVKDAFLRSGNYNVIVVDWSSF 326
YC T +QW Y D N ++K + S Y++ W S+
Sbjct: 195 YCL--TGNQWQSYPDGNGVIKVRHMYSVKYSLTGDQWQSY 232
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 222 TRSQWHCYDDDNPIVKDAFLRSGNYNVIVVDWSSF 326
T QW Y D N ++K + S Y++ W S+
Sbjct: 225 TGDQWQSYQDGNGVIKVRHMYSVKYSLTGDQWQSY 259
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 222 TRSQWHCYDDDNPIVKDAFLRSGNYNVIVVDWSSF 326
T QW Y D N ++K + S Y++ W S+
Sbjct: 252 TGDQWQSYPDGNGVIKVRHMYSVKYSLTGDQWQSY 286
>SB_15581| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-11)
Length = 133
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 222 TRSQWHCYDDDNPIVKDAFLRSGNYNVIVVDWSSF 326
T QW Y D+N ++K + S Y++ W S+
Sbjct: 91 TGDQWQSYQDENGMIKVRHMYSVKYSLTGDQWQSY 125
>SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2
Query: 611 KNGLGIAIG---HIDFFVNGRLVQPGCTNNLCSHNRA 712
K+ G+ IG H+D VNG VQ C+HN+A
Sbjct: 12 KSSEGMYIGADLHLDKDVNGAYVQGSFIGGFCTHNKA 48
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 381 IATFLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARI 503
+ +FL + + K H+ G ++G H+ GV +VA +
Sbjct: 120 LLSFLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASV 160
>SB_7284| Best HMM Match : F5_F8_type_C (HMM E-Value=7.3e-10)
Length = 725
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 222 TRSQWHCYDDDNPIVKDAFLRSGNYNVIVVDWSSF 326
T QW Y + N ++K + S Y++ W S+
Sbjct: 117 TEDQWQSYQEGNGVIKGRHMYSLEYSLTGDQWQSY 151
>SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38)
Length = 450
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 678 PGWTRRPLTKKSMC-PIAMPKPFLLTPDPSV*ITSTY*ASFVPSRSTLFSQSRA 520
P +P+ +C P+ P P +++P P I + + VP+ TL QS A
Sbjct: 193 PSPASQPVAPSPVCIPVQSPAPNMMSPSPQQFIAQSPAPTSVPTPGTLNVQSPA 246
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,413,803
Number of Sequences: 59808
Number of extensions: 578950
Number of successful extensions: 1709
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1701
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2383424791
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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