Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0716
         (791 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   1.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   6.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   6.5  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 266 FTKNTIVRPYQWINHISAVGEHNSPNTWSIYIYN 367
           + +NT V P Q +  +S   ++N PN    Y YN
Sbjct: 330 YVRNTTV-PTQGVARMSRGRQYNYPNPQQQYYYN 362


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 266 FTKNTIVRPYQWINHISAVGEHNSPNTWSIYIYN 367
           + +NT V P Q +  +S   ++N PN    Y YN
Sbjct: 278 YVRNTTV-PTQGVARMSRGRQYNYPNPQQQYYYN 310


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -2

Query: 709 CVLKVFSALFVSAN*-FYHNVITFVYFYYYCIVFKVFRVNII 587
           C   +F+  F+     FY+  I  +  YY+   F +F V+++
Sbjct: 87  CPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLL 128


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 496  KLRPTAMAIQALNGYLLHGQP 558
            KL+P    ++ ++GY +H +P
Sbjct: 1415 KLKPHESDVEPIHGYTIHYKP 1435


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 664  FYHNVITFVYFYYYCIVFK 608
            FY+N+I  ++F   C   K
Sbjct: 947  FYYNIIPILFFMLVCFTCK 965


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 664  FYHNVITFVYFYYYCIVFK 608
            FY+N+I  ++F   C   K
Sbjct: 947  FYYNIIPILFFMLVCFTCK 965


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 664  FYHNVITFVYFYYYCIVFK 608
            FY+N+I  ++F   C   K
Sbjct: 947  FYYNIIPILFFMLVCFTCK 965


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 664  FYHNVITFVYFYYYCIVFK 608
            FY+N+I  ++F   C   K
Sbjct: 947  FYYNIIPILFFMLVCFTCK 965


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 643 FVYFYYYCIVFKVFR 599
           F Y Y+ C++  +FR
Sbjct: 156 FYYTYFLCVIVCIFR 170


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -2

Query: 652 VITFVYFYYYCIVFKVFRVNIISFAF*NLQREVDRAID 539
           + TF+      + F++   + ++F+  +L  E+ RAID
Sbjct: 448 IFTFITLLTIGLYFQLCEFSRLNFSVEHLLMELSRAID 485


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,431
Number of Sequences: 336
Number of extensions: 3857
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)