Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0716
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 65 6e-11
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 50 2e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 50 3e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 47 2e-05
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 45 5e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 45 5e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 45 5e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 45 5e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 45 5e-05
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 45 7e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 44 9e-05
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 43 2e-04
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 43 3e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 42 7e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 42 7e-04
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 41 9e-04
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 41 9e-04
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 41 9e-04
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 41 9e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 40 0.002
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 40 0.002
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 40 0.002
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 40 0.002
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 40 0.002
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 40 0.002
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 40 0.003
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 39 0.004
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 39 0.004
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 39 0.005
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 39 0.005
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 38 0.006
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 38 0.006
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 38 0.006
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 38 0.008
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 38 0.008
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 38 0.008
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 38 0.008
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 38 0.008
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 38 0.008
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 38 0.011
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 38 0.011
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 37 0.014
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 37 0.014
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 37 0.019
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 37 0.019
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 36 0.033
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 35 0.058
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 35 0.058
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 35 0.058
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 35 0.077
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 35 0.077
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 35 0.077
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 35 0.077
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 34 0.10
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 33 0.18
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 33 0.18
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 33 0.18
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 33 0.18
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 33 0.18
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 33 0.23
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 33 0.23
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.31
AF016658-5|AAB66044.1| 186|Caenorhabditis elegans Hypothetical ... 33 0.31
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 32 0.41
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 32 0.41
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 32 0.41
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 31 0.71
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 31 0.71
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 0.71
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 31 0.71
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 31 0.94
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 31 0.94
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 31 0.94
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 31 0.94
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.94
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 31 0.94
AC006795-7|AAF59497.2| 199|Caenorhabditis elegans Hypothetical ... 31 0.94
U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 30 2.2
U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF077546-1|AAC26314.1| 354|Caenorhabditis elegans Hypothetical ... 29 3.8
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 29 5.0
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 29 5.0
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 29 5.0
Z83238-11|CAE11318.1| 326|Caenorhabditis elegans Hypothetical p... 28 8.8
Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical pr... 28 8.8
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 64.9 bits (151), Expect = 6e-11
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRIAA--------GIAFVLYEHQYEAERAIQN 170
NLY+ +P +TL L +F FG+II SRI + G+ FV ++ + EA+ AI+
Sbjct: 129 NLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKT 188
Query: 171 INGSTPPGFLHPLTVKYANKSNPHKHKNIIILLQKI 278
+NGS P G +TVK+AN + K ++ L+ +
Sbjct: 189 LNGSIPSGCSEQITVKFANNPASNNPKGLLSDLEAV 224
Score = 61.7 bits (143), Expect = 6e-10
Identities = 25/54 (46%), Positives = 40/54 (74%)
Frame = +2
Query: 347 WSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQ 508
+ +++YN++ + ++ LWQLF +GAIV+VKI+RD T + KGY FV+M NY +
Sbjct: 374 YCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNYTE 426
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQ 508
++Y+ I + L +F P+G I++ +I+ D+ T SKG GFV D+
Sbjct: 129 NLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDE 181
Score = 35.5 bits (78), Expect = 0.044
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 404 LFGPYGAIVSVKIIRDHQTNKSKGYGFVT-MRNYDQLR 514
LF G I S K++RD T +S GYGFV +R D LR
Sbjct: 61 LFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Frame = +3
Query: 6 ADWNLYICNLPNELTLQGLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAI 164
A + L++ NL ++ L LF+QFG I+N +I G AFV + EA A+
Sbjct: 372 AGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAM 431
Query: 165 QNINGSTPPG 194
++NG+ G
Sbjct: 432 LSLNGTNLAG 441
Score = 32.7 bits (71), Expect = 0.31
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Frame = +3
Query: 3 EADWNLYICNLPNELTLQGLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAER 158
E+ NL I LP +T + + LF G I + ++ + G FV Y + +A R
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Query: 159 AIQNINGSTPPGFLHPLTVKYANKSNPH-KHKNIII 263
A+ + NG + V YA SN K N+ +
Sbjct: 99 AVSSFNGLRLQN--KTIKVSYARPSNDQIKGSNLYV 132
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +2
Query: 338 PNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRN 499
P+ +++IY++ E + L Q+F P+G IVS K+ D TN+SK +GFV+ N
Sbjct: 426 PDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDN 479
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = +3
Query: 9 DWNLYICNLPNELTLQGLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQ 167
D L+I L + + + LFA FG + + + G AFV Y+H +A AI
Sbjct: 123 DKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAIS 182
Query: 168 NINGS-TPPGFLHPLTVKYANKSNPHKHKNI 257
++GS T PG L VKYA+ +++ +
Sbjct: 183 ALHGSQTMPGASSSLVVKYADTEKERQNRRM 213
Score = 31.9 bits (69), Expect = 0.54
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRIAAGIA--------FVLYEHQYEAERAIQN 170
NL+I +LP E L +FA FG I+++++ A FV Y++ + ++ AI
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 171 ING 179
+NG
Sbjct: 490 MNG 492
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +2
Query: 338 PNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRN 499
P+ +++IY++ E + L Q+F P+G IVS K+ D TN+SK +GFV+ N
Sbjct: 426 PDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDN 479
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = +3
Query: 9 DWNLYICNLPNELTLQGLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQ 167
D L+I L + + + LFA FG + + + G AFV Y+H +A AI
Sbjct: 123 DKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAIS 182
Query: 168 NINGS-TPPGFLHPLTVKYANKSNPHKHKNI 257
++GS T PG L VKYA+ +++ +
Sbjct: 183 ALHGSQTMPGASSSLVVKYADTEKERQNRRM 213
Score = 31.9 bits (69), Expect = 0.54
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRIAAGIA--------FVLYEHQYEAERAIQN 170
NL+I +LP E L +FA FG I+++++ A FV Y++ + ++ AI
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 171 ING 179
+NG
Sbjct: 490 MNG 492
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +2
Query: 323 GEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
G N + S+++ NI+ +V E T+ +F G ++S+K++ D +T K KGYGF+
Sbjct: 10 GVGNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFI 64
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
+++ +++ EV+ L + F P+G + K+IRD T KSKGYGFV+
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVS 69
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Frame = +3
Query: 12 WNLYICNLPNELTLQGLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQ 167
+++++ +L +E+ Q L F FG + ++++ + G FV Y + EAERAI+
Sbjct: 22 FHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIE 81
Query: 168 NING 179
+NG
Sbjct: 82 QMNG 85
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
+++ +++ EV+ L + F P+G + K+IRD T KSKGYGFV+
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVS 79
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Frame = +3
Query: 12 WNLYICNLPNELTLQGLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQ 167
+++++ +L +E+ Q L F FG + ++++ + G FV Y + EAERAI+
Sbjct: 32 FHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIE 91
Query: 168 NING 179
+NG
Sbjct: 92 QMNG 95
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
+++ +++ EV+ L + F P+G + K+IRD T KSKGYGFV+
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVS 182
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Frame = +3
Query: 12 WNLYICNLPNELTLQGLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQ 167
+++++ +L +E+ Q L F FG + ++++ + G FV Y + EAERAI+
Sbjct: 135 FHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIE 194
Query: 168 NING 179
+NG
Sbjct: 195 QMNG 198
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
+++ +++ EV+ L + F P+G + K+IRD T KSKGYGFV+
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVS 150
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Frame = +3
Query: 12 WNLYICNLPNELTLQGLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQ 167
+++++ +L +E+ Q L F FG + ++++ + G FV Y + EAERAI+
Sbjct: 103 FHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIE 162
Query: 168 NING 179
+NG
Sbjct: 163 QMNG 166
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Frame = +2
Query: 323 GEHNS-PNT---WSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
GE+ S P T + +++ ++ E++ L + F +G + KIIRD+ TNK KGYGFV+
Sbjct: 120 GENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVS 179
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Frame = +3
Query: 12 WNLYICNLPNELTLQGLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQ 167
+++++ +L +E+ L F +FG + ++I G FV Y + +AERAI
Sbjct: 132 FHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAID 191
Query: 168 NINGS 182
+NG+
Sbjct: 192 EMNGA 196
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2
Query: 323 GEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRN 499
G+ P+ +++IY++ + + L F P+G I+S K+ D TN SK +GFV+ N
Sbjct: 327 GDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 385
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQN 170
NL+I +LP + L FA FG I+++++ + FV YE+ A AI
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 171 ING 179
+NG
Sbjct: 396 MNG 398
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2
Query: 323 GEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRN 499
G+ P+ +++IY++ + + L F P+G I+S K+ D TN SK +GFV+ N
Sbjct: 491 GDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 305 NHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGF 484
N +S + +++ I + E +LF YG++ S I+RD T SKG F
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 485 VT 490
VT
Sbjct: 101 VT 102
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQN 170
NL+I +LP + L FA FG I+++++ + FV YE+ A AI
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 171 ING 179
+NG
Sbjct: 560 MNG 562
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2
Query: 323 GEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRN 499
G+ P+ +++IY++ + + L F P+G I+S K+ D TN SK +GFV+ N
Sbjct: 491 GDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 305 NHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGF 484
N +S + +++ I + E +LF YG++ S I+RD T SKG F
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 485 VT 490
VT
Sbjct: 101 VT 102
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQN 170
NL+I +LP + L FA FG I+++++ + FV YE+ A AI
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 171 ING 179
+NG
Sbjct: 560 MNG 562
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2
Query: 323 GEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRN 499
G+ P+ +++IY++ + + L F P+G I+S K+ D TN SK +GFV+ N
Sbjct: 420 GDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 478
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 305 NHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGF 484
N +S + +++ I + E +LF YG++ S I+RD T SKG F
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 485 VT 490
VT
Sbjct: 101 VT 102
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQN 170
NL+I +LP + L FA FG I+++++ + FV YE+ A AI
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 488
Query: 171 ING 179
+NG
Sbjct: 489 MNG 491
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2
Query: 323 GEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRN 499
G+ P+ +++IY++ + + L F P+G I+S K+ D TN SK +GFV+ N
Sbjct: 491 GDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 305 NHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGF 484
N +S + +++ I + E +LF YG++ S I+RD T SKG F
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 485 VT 490
VT
Sbjct: 101 VT 102
Score = 31.1 bits (67), Expect = 0.94
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI--------AAGIAFVLYEHQYEAERAIQN 170
NL+I +LP + L FA FG I+++++ + FV YE+ A AI
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 171 ING 179
+NG
Sbjct: 560 MNG 562
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +2
Query: 341 NTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRN 499
N + ++ ++ EV + L + F Y + K++R+ +TNKSKGYGFV+ R+
Sbjct: 201 NDFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRD 253
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRN 499
+++ +++ +V L F +G + K+IRD QT KSKGYGFV+ N
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPN 185
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI--AAGIAFVLYEHQYEAERAIQNINGSTP 188
++Y+ N+ + T L LF+ +G I RI AFV YE + A +AI +NG
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEM 297
Query: 189 PG 194
G
Sbjct: 298 AG 299
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIR 448
S+Y+ NI+ + + L LF YG I V+I +
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRIFK 270
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +2
Query: 296 QWINHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKG 475
Q N VG ++ T I++ + + TL + F +G I +I D T KS+G
Sbjct: 19 QSTNAEPVVGSRDTMFT-KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRG 77
Query: 476 YGFVTMRN 499
YGFVTM++
Sbjct: 78 YGFVTMKD 85
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Frame = +3
Query: 18 LYICNLPNELTLQGLHGLFAQFG-----RIINSRIAAGIAFVLYEHQYEAERAIQNING 179
LYI NLP ++T + ++ +F +FG R+ N+ G AFV+YE ++A+ A ++++G
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIFDAKTACEHLSG 79
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQLRWQYKH 529
+YI N+ ++ ++++FG +GA V+ IR T +++G FV + + +H
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGA---VRQIRVGNTAETRGTAFVVYEDIFDAKTACEH 76
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 308 HISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
H ++ + +P++ ++YI + + L ++ YG I S K I D TN KGYGFV
Sbjct: 94 HRASSNFNTTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFV 153
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQNI 173
NLYI NLP + T Q L +FG +I++RI + G+ F + + + E I +
Sbjct: 189 NLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISAL 248
Query: 174 NG 179
NG
Sbjct: 249 NG 250
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +2
Query: 302 INHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSV-KIIRDHQTNKSKGY 478
+N SA E N +I++ N+ EV+E L+ F +G I+ V KI+RD + SKG+
Sbjct: 86 VNKASA-HEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGF 144
Query: 479 GFVTMRNYD 505
F+ +++
Sbjct: 145 AFINFASFE 153
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
+IY+ + +V E LW+L G +VSV + +D T +G+GFV
Sbjct: 14 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFV 59
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +2
Query: 302 INHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSV-KIIRDHQTNKSKGY 478
+N SA E N +I++ N+ EV+E L+ F +G I+ V KI+RD + SKG+
Sbjct: 96 VNKASA-HEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGF 154
Query: 479 GFVTMRNYD 505
F+ +++
Sbjct: 155 AFINFASFE 163
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
+IY+ + +V E LW+L G +VSV + +D T +G+GFV
Sbjct: 24 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFV 69
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 41.1 bits (92), Expect = 9e-04
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Frame = +3
Query: 12 WNLYICNLPNELTLQGLHGLFAQFGRIINSRIAA--------GIAFVLYEHQYEAERAIQ 167
+++Y+ N P + T + L F+ G+I N RI G AF+ + + A+RA++
Sbjct: 5 FSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVE 64
Query: 168 NINGSTPPGFLHPLTVKYANK 230
+NG+ G PL V ANK
Sbjct: 65 QMNGAEFNG--RPLRVNLANK 83
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 41.1 bits (92), Expect = 9e-04
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 9 DWNLYICNLPNELTLQGLHGLFAQFGRIIN---SRIAAGIAFVLYEHQYEAERAIQNING 179
D +Y+ LP++ T Q L +F +FGRI +R G AFV Y+ +AE A++ ++G
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 180 S 182
S
Sbjct: 62 S 62
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 41.1 bits (92), Expect = 9e-04
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 9 DWNLYICNLPNELTLQGLHGLFAQFGRIIN---SRIAAGIAFVLYEHQYEAERAIQNING 179
D +Y+ LP++ T Q L +F +FGRI +R G AFV Y+ +AE A++ ++G
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 180 S 182
S
Sbjct: 62 S 62
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 41.1 bits (92), Expect = 9e-04
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +3
Query: 9 DWNLYICNLPNELTLQGLHGLFAQFGRIIN---SRIAAGIAFVLYEHQYEAERAIQNING 179
D +Y+ LP++ T Q L +F +FGRI +R G AFV Y+ +AE A++ ++G
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 180 S 182
S
Sbjct: 62 S 62
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +2
Query: 341 NTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRN 499
+ W IYI ++ + E + +F YG ++++ +IRD T KSKG+ F+ ++
Sbjct: 37 SAW-IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKD 88
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 341 NTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQL 511
+T +Y+ + + E L + F YG + +II D T K +G+GFVT ++D +
Sbjct: 112 STKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 168
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 341 NTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
N I++ + + + + + +G I + ++RD T +S+G+GFVT
Sbjct: 21 NLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVT 70
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 341 NTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQL 511
+T +Y+ + + E L + F YG + +II D T K +G+GFVT ++D +
Sbjct: 74 STKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 130
Score = 32.7 bits (71), Expect = 0.31
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 401 QLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
+ + +G I + ++RD T +S+G+GFVT
Sbjct: 3 EFYSQFGEITDIIVMRDPTTKRSRGFGFVT 32
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 341 NTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQL 511
+T +Y+ + + E L + F YG + +II D T K +G+GFVT ++D +
Sbjct: 74 STKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 130
Score = 32.7 bits (71), Expect = 0.31
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 401 QLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
+ + +G I + ++RD T +S+G+GFVT
Sbjct: 3 EFYSQFGEITDIIVMRDPTTKRSRGFGFVT 32
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 341 NTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQL 511
+T +Y+ + + E L + F YG + +II D T K +G+GFVT ++D +
Sbjct: 112 STKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 168
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 341 NTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
N I++ + + + + + +G I + ++RD T +S+G+GFVT
Sbjct: 21 NLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVT 70
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 341 NTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQL 511
+T +Y+ + + E L + F YG + +II D T K +G+GFVT ++D +
Sbjct: 112 STKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 168
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 341 NTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
N I++ + + + + + +G I + ++RD T +S+G+GFVT
Sbjct: 21 NLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVT 70
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 329 HNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
HN T +Y+ +V E L F P+G +V++ I D+++ K +G+GFV
Sbjct: 7 HNRKRT--LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFV 57
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 302 INHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYG 481
+N S G H S + ++I ++ + L FG +G + ++RD T +++G+G
Sbjct: 30 LNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFG 89
Query: 482 FVT 490
F+T
Sbjct: 90 FIT 92
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 401 QLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
Q F YG + ++ D T + +G+GFVT
Sbjct: 152 QYFETYGKVEDAMLMFDKATQRHRGFGFVT 181
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 302 INHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYG 481
+N S G H S + ++I ++ + L FG +G + ++RD T +++G+G
Sbjct: 30 LNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFG 89
Query: 482 FVT 490
F+T
Sbjct: 90 FIT 92
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 401 QLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
Q F YG + ++ D T + +G+GFVT
Sbjct: 152 QYFETYGKVEDAMLMFDKATQRHRGFGFVT 181
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Frame = +3
Query: 12 WNLYICNLPNELTLQGLHGLFAQFGRIINSRIA--------AGIAFVLYEHQYEAERAIQ 167
+++Y+ N+P + T + + FA G + N RI G AFV + + A+RA++
Sbjct: 6 FSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVE 65
Query: 168 NINGSTPPGFLHPLTVKYANK 230
+NG G L V YANK
Sbjct: 66 QLNGVAFNG--RNLRVNYANK 84
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +2
Query: 323 GEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYG 481
G+ P+ +++IY++ + + L F P+G I+S K+ D TN SK +G
Sbjct: 68 GDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFG 120
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 326 EHNSP-NTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
+H+SP ++I ++ + + L F +G +V +IRD T S+G+GFVT
Sbjct: 41 QHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVT 96
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 326 EHNSP-NTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
+H+SP ++I ++ + + L F +G +V +IRD T S+G+GFVT
Sbjct: 61 QHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVT 116
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 326 EHNSP-NTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVT 490
+H+SP ++I ++ + + L F +G +V +IRD T S+G+GFVT
Sbjct: 62 QHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVT 117
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 359 IYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYD 505
+ N+ E+ E L LFG G ++ + I RD T KG+ FVT + D
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRD 228
Score = 35.9 bits (79), Expect = 0.033
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Frame = +3
Query: 24 ICNLPNELTLQGLHGLFAQFGRIINSRIA--------AGIAFVLYEHQYEAERAIQNIN 176
+ NLP E+ L LF + GR+I IA G AFV +E + +A RAI +N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTM 493
IY+ NI E L +F YG ++SV+I+ + + SKG+GFVT+
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDR--GSKGFGFVTL 97
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMR 496
S+Y+ ++ +V E L++ F G ++S+++ RD+ T S GY +V +
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
Score = 36.3 bits (80), Expect = 0.025
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQLRWQY-K 526
++Y+ N+ V++ L + F YG I S K++ D + +SKG+GFV ++ +
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTE 376
Query: 527 H*TDIYCTVNLSL*VSKRKRD 589
+ + C+ L + + +RK D
Sbjct: 377 MNSKMVCSKPLYVAIGQRKED 397
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRIAA-------GIAFVLYEHQYEAERAIQNI 173
N++I NL + + ++ F+ FG I++ ++A G FV +E + A+ AIQ +
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 180
Query: 174 NG 179
NG
Sbjct: 181 NG 182
Score = 35.9 bits (79), Expect = 0.033
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI------AAGIAFVLYEHQYEAERAIQNIN 176
N+Y+ N + + L +FA+FG I + + + G FV + + EAE A+Q ++
Sbjct: 214 NVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 273
Query: 177 GSTPPGFLHPLTVKYANKSN 236
ST G L V A K +
Sbjct: 274 DSTIEGTDLKLHVCRAQKKS 293
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQ 508
++Y+ N + TL ++F +G I S +++ KSKG+GFV N ++
Sbjct: 214 NVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVE--GKSKGFGFVAFANPEE 264
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMR 496
S+Y+ ++ +V E L++ F G ++S+++ RD+ T S GY +V +
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
Score = 37.1 bits (82), Expect = 0.014
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI------AAGIAFVLYEHQYEAERAIQNIN 176
N+Y+ N + + L LFA+FG I + + + G FV + + EAE A+Q ++
Sbjct: 154 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 213
Query: 177 GSTPPGFLHPLTVKYANKSN 236
ST G L V A K +
Sbjct: 214 DSTIEGTDLKLHVCRAQKKS 233
Score = 36.7 bits (81), Expect = 0.019
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQLRWQY-K 526
++Y+ N+ V++ L + F YG I S K++ D + +SKG+GFV ++ +
Sbjct: 258 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTE 316
Query: 527 H*TDIYCTVNLSL*VSKRKRD 589
+ + C+ L + +++RK D
Sbjct: 317 MNSKMVCSKPLYVAIAQRKED 337
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQ 508
++Y+ N + TL +LF +G I S +++ KSKG+GFV N ++
Sbjct: 154 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE--GKSKGFGFVAFANPEE 204
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMR 496
S+Y+ ++ +V E L++ F G ++S+++ RD+ T S GY +V +
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
Score = 37.1 bits (82), Expect = 0.014
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI------AAGIAFVLYEHQYEAERAIQNIN 176
N+Y+ N + + L LFA+FG I + + + G FV + + EAE A+Q ++
Sbjct: 214 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 273
Query: 177 GSTPPGFLHPLTVKYANKSN 236
ST G L V A K +
Sbjct: 274 DSTIEGTDLKLHVCRAQKKS 293
Score = 36.7 bits (81), Expect = 0.019
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQLRWQY-K 526
++Y+ N+ V++ L + F YG I S K++ D + +SKG+GFV ++ +
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTE 376
Query: 527 H*TDIYCTVNLSL*VSKRKRD 589
+ + C+ L + +++RK D
Sbjct: 377 MNSKMVCSKPLYVAIAQRKED 397
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRIAA-------GIAFVLYEHQYEAERAIQNI 173
N++I NL + + ++ F+ FG I++ ++A G FV +E + A+ AIQ +
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 180
Query: 174 NG 179
NG
Sbjct: 181 NG 182
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQ 508
++Y+ N + TL +LF +G I S +++ KSKG+GFV N ++
Sbjct: 214 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE--GKSKGFGFVAFANPEE 264
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTM 493
IY+ NI E L +F YG ++SV+I+ + + SKG+GFVT+
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDR--GSKGFGFVTL 97
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
++YI + + L ++ YG I S K I D TN KGYGFV
Sbjct: 82 NLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFV 127
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQNI 173
NLYI NLP + T Q L +FG +I++RI + G+ F + + + E I +
Sbjct: 163 NLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISAL 222
Query: 174 NG 179
NG
Sbjct: 223 NG 224
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYD 505
+++ NI + E L +F G +V V+II + + SKG+GFVTM+N D
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPD 150
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYD 505
+++ NI + E L +F G +V V+II + + SKG+GFVTM+N D
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPD 150
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPY-GAIVSVKIIRDHQTNKSKGYGFVTMR 496
+I++ N+ E+ E L F G + +V+I+RD T K KG+ FV +
Sbjct: 247 AIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFK 296
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 37.1 bits (82), Expect = 0.014
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI------AAGIAFVLYEHQYEAERAIQNIN 176
N+Y+ N + + L LFA+FG I + + + G FV + + EAE A+Q ++
Sbjct: 151 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 210
Query: 177 GSTPPGFLHPLTVKYANKSN 236
ST G L V A K +
Sbjct: 211 DSTIEGTDLKLHVCRAQKKS 230
Score = 36.7 bits (81), Expect = 0.019
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQLRWQY-K 526
++Y+ N+ V++ L + F YG I S K++ D + +SKG+GFV ++ +
Sbjct: 255 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTE 313
Query: 527 H*TDIYCTVNLSL*VSKRKRD 589
+ + C+ L + +++RK D
Sbjct: 314 MNSKMVCSKPLYVAIAQRKED 334
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRIAA-------GIAFVLYEHQYEAERAIQNI 173
N++I NL + + ++ F+ FG I++ ++A G FV +E + A+ AIQ +
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 117
Query: 174 NG 179
NG
Sbjct: 118 NG 119
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQ 508
++Y+ N + TL +LF +G I S +++ KSKG+GFV N ++
Sbjct: 151 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE--GKSKGFGFVAFANPEE 201
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMR 496
S+YI ++ +V E L++ F G ++S+++ RD+ + S GY +V +
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQ 106
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQNI 173
NLY+ N+ +L GL F+ FG I ++++ + G FV +E EA A+ ++
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 174 N 176
N
Sbjct: 404 N 404
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYD 505
++++ N +++ L +F +G I S ++ D Q K KG+GFV + D
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMR 496
S+YI ++ +V E L++ F G ++S+++ RD+ + S GY +V +
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQ 106
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Frame = +3
Query: 15 NLYICNLPNELTLQGLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAERAIQNI 173
NLY+ N+ +L GL F+ FG I ++++ + G FV +E EA A+ ++
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 174 N 176
N
Sbjct: 404 N 404
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYD 505
++++ N +++ L +F +G I S ++ D Q K KG+GFV + D
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRN 499
IY+ +I +V E TL LF G I ++++ D + S+GY FVT N
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCN 250
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 299 WINHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDH 454
W H E +YI NI V E L +LF Y ++ VK ++D+
Sbjct: 361 WAEHQEEPDEDTMSKVKVLYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDY 412
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = +3
Query: 18 LYICNLPNELTLQGLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAERAIQNINGSTPPGF 197
LYI N+ +T + L+ LF ++ + + AF+ + + + +A++ NG G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEG- 437
Query: 198 LHPLTVKYANKSNPHKHK 251
TV A+ + P + K
Sbjct: 438 ----TVVEASLAKPPQEK 451
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 305 NHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGF 484
N +S + +++ I + E +LF YG++ S I+RD T SKG F
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 485 VT 490
VT
Sbjct: 101 VT 102
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 305 NHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGF 484
N +S + +++ I + E +LF YG++ S I+RD T SKG F
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 485 VT 490
VT
Sbjct: 101 VT 102
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 305 NHISAVGEHNSPNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGF 484
N +S + +++ I + E +LF YG++ S I+RD T SKG F
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 485 VT 490
VT
Sbjct: 101 VT 102
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 34.7 bits (76), Expect = 0.077
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +3
Query: 18 LYICNLPNELTLQGLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAERAIQNING 179
+YI LPN + + + F +G++ + + G FV ++ Q +A+ A+ ++NG
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNG 57
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 34.7 bits (76), Expect = 0.077
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 18 LYICNLPNELTLQGLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAERAIQNINGSTPPGF 197
LY+ +P + + +G+I N + G AFV +E +AE A +++G T G
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEGS 63
Query: 198 LHPLTVKYA 224
L V+ A
Sbjct: 64 SMRLVVEMA 72
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 34.7 bits (76), Expect = 0.077
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 18 LYICNLPNELTLQGLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAERAIQNINGSTPPGF 197
LY+ +P + + +G+I N + G AFV +E +AE A +++G T G
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEGS 63
Query: 198 LHPLTVKYA 224
L V+ A
Sbjct: 64 SMRLVVEMA 72
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 34.7 bits (76), Expect = 0.077
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 18 LYICNLPNELTLQGLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAERAIQNINGSTPPGF 197
LY+ +P + + +G+I N + G AFV +E +AE A +++G T G
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEGS 63
Query: 198 LHPLTVKYA 224
L V+ A
Sbjct: 64 SMRLVVEMA 72
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Frame = +3
Query: 12 WNLYICNLPNELTLQGLHGLFAQFGRIINSRIAA--------GIAFVLYEHQYEAERAIQ 167
+++Y+ N P + T L F+Q G + N RI G AFV + + A+RA+
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVD 63
Query: 168 NING 179
NG
Sbjct: 64 QFNG 67
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
S+ I N++ + L + F YG I V I RD + +SKG+GFV
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFV 65
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
S+ I N++ + L + F YG I V I RD + +SKG+GFV
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFV 65
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
IY+ +I+ E+ E L + F P+G I S+ + D T K + FV
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFV 148
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
IY+ +I+ E+ E L + F P+G I S+ + D T K + FV
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFV 148
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
IY+ +I+ E+ E L + F P+G I S+ + D T K + FV
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFV 148
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +3
Query: 9 DWNLYICNLPNELTLQGLHGLFAQFGRI----INSRIAAGIAFVLYEHQYEAERAIQNIN 176
D +Y+ NLP ++ + + +F ++GRI I S AFV +E +AE A++ +
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 177 G 179
G
Sbjct: 68 G 68
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +3
Query: 9 DWNLYICNLPNELTLQGLHGLFAQFGRI----INSRIAAGIAFVLYEHQYEAERAIQNIN 176
D +Y+ NLP ++ + + +F ++GRI I S AFV +E +AE A++ +
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 177 G 179
G
Sbjct: 68 G 68
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 359 IYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
++N++ E L +FG +G I ++ D + S+G+GF+
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFI 122
>AF016658-5|AAB66044.1| 186|Caenorhabditis elegans Hypothetical
protein B0047.4 protein.
Length = 186
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +2
Query: 449 DHQTNKSKGYGFVTMRNYDQLRWQYKH*TDIYCTVNLSL----*VSKRKRDNVDTKDFKN 616
DHQ K++GYGF + N+D L Y I V + + +SK+ + D + K
Sbjct: 101 DHQFTKNEGYGFPKLMNWDTLIKDYLIDDSITIEVTVKITKMHGISKKALKSFDKSNEKF 160
Query: 617 DTVIIKIDKSNNIMIKLI 670
V++ ++ +++ +
Sbjct: 161 SDVVLSVEDKKFFVLRKV 178
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 347 WSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
W +++ NI E E + F YG I ++ + D +T KGY V
Sbjct: 55 WIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALV 101
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
++ I IA + L + F GA+ V+II D +T +SKG +V
Sbjct: 26 TLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 350 SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
++ I IA + L + F GA+ V+II D +T +SKG +V
Sbjct: 171 TLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 31.5 bits (68), Expect = 0.71
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQ 508
I++ E L + F + A+ VK+++ +SKGYGF+T DQ
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQ 118
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 18 LYICNLPNELTLQGLHGLFAQFGRIINSRIAA-GIAFVLYEHQYEAERAIQNING 179
L++ NLPNE+ L LF+ G I ++ G AF+ + + AE A + I+G
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDG 172
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 18 LYICNLPNELTLQGLHGLFAQFGRIINSRIAA-GIAFVLYEHQYEAERAIQNING 179
L++ NLPNE+ L LF+ G I ++ G AF+ + + AE A + I+G
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDG 172
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 31.5 bits (68), Expect = 0.71
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYDQ 508
I++ E L + F + A+ VK+++ +SKGYGF+T DQ
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQ 119
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 344 TWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
T +++ N+ +E L LF YG + V+++ D +T KG+ V
Sbjct: 278 TGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIV 325
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 404 LFGPYGAIVSVKIIRDHQTNKSKGYGFVTMRNYD 505
+F G +V V+II + + SKG+GFVTM+N D
Sbjct: 1 MFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPD 32
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTM 493
+++ NI + L +F +G + V+II + + SKG+GFVTM
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTM 199
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFVTM 493
+++ NI + L +F +G + V+II + + SKG+GFVTM
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTM 199
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 18 LYICNLPNELTLQGLHGLFAQFGRIINSRIAAG--IAFVLYEHQYEAERAIQNINGSTPP 191
L++ L + + L F +FG + N G A+V+YE+ + ++ A +++ G+
Sbjct: 253 LFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQPYAYVVYENTHTSQEACRSLRGACIS 312
Query: 192 GFLHPLTVKYA 224
HP+ V YA
Sbjct: 313 KGNHPIMVDYA 323
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 18 LYICNLPNELTLQGLHGLFAQFGRIINSRIAAG--IAFVLYEHQYEAERAIQNINGSTPP 191
L++ L + + L F +FG + N G A+V+YE+ + ++ A +++ G+
Sbjct: 253 LFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQPYAYVVYENTHTSQEACRSLRGACIS 312
Query: 192 GFLHPLTVKYA 224
HP+ V YA
Sbjct: 313 KGNHPIMVDYA 323
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 18 LYICNLPNELTLQGLHGLFAQFGRIINSRIAAG--IAFVLYEHQYEAERAIQNINGSTPP 191
L++ L + + L F +FG + N G A+V+YE+ + ++ A +++ G+
Sbjct: 230 LFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQPYAYVVYENTHTSQEACRSLRGACIS 289
Query: 192 GFLHPLTVKYA 224
HP+ V YA
Sbjct: 290 KGNHPIMVDYA 300
>AC006795-7|AAF59497.2| 199|Caenorhabditis elegans Hypothetical
protein Y50D4B.1 protein.
Length = 199
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 504 TNCDGNTSIKRISIARSTSLCKFQNAKEIMLTRKTLKT 617
+NC K I +ST +C F N K + T K LKT
Sbjct: 26 SNCRKRKKRKNIFFRQSTKVCFFFNRKSVQKTGKNLKT 63
>U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical
protein C24B5.1 protein.
Length = 427
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Frame = -2
Query: 790 LTMLIAQSNKYLNKNPTDFTRSCSVWCCVLKVFSALF-VSAN*FYHNVITFVYFY----- 629
+ ++ +SN+ LNK PT +V+ L S++F +S F+ + ++YFY
Sbjct: 95 MVWILIRSNRMLNKLPT------NVYLLCLAAMSSIFLLSLLVFWIEEVAYIYFYDIFQD 148
Query: 628 ------YYCIVFKVFRVNIISFA 578
YY +F F ++ FA
Sbjct: 149 SLLRNSYYSCIFNTFLAHVCDFA 171
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 338 PNTWSIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSK 472
P +IY+ N + EV+E L +LF G +V V I+RD + + +K
Sbjct: 10 PEERTIYVANFSEEVDEELLEELFIQAGPVVKV-ILRDVRDSNAK 53
>U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical
protein C24G7.4 protein.
Length = 663
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 87 RIINSRIAAGIAFVLYEHQYEAERAIQNINGSTPPGF-LHPLTVKYANKSNP 239
R +N GIA + HQ + + +N S+PP F + P++ K + S P
Sbjct: 606 RQLNQPSTDGIARIRLPHQTSRQNSTENYYSSSPPIFTIEPMSRKQSKTSLP 657
>AF077546-1|AAC26314.1| 354|Caenorhabditis elegans Hypothetical
protein T08E11.6 protein.
Length = 354
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 284 VRPYQWINHISAVGEHNSPNTWSIYIYN 367
V P QWI+H + + NS + SI+ YN
Sbjct: 126 VTPRQWIDHCMELTDSNSIDQLSIFAYN 153
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 308 HISAVGEHNSPNTW-SIYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGF 484
+IS + E NT ++Y+ ++ + L F YG+I SV + D T +G+
Sbjct: 11 NISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFAS 70
Query: 485 VTMRNYD 505
+T + D
Sbjct: 71 ITFDSKD 77
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
I++ I+ EV L F YG + ++ D +S+G+ FV
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFV 75
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 353 IYIYNIALEVEELTLWQLFGPYGAIVSVKIIRDHQTNKSKGYGFV 487
I++ I+ EV L F YG + ++ D +S+G+ FV
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFV 75
>Z83238-11|CAE11318.1| 326|Caenorhabditis elegans Hypothetical
protein T08G3.12 protein.
Length = 326
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/70 (22%), Positives = 39/70 (55%)
Frame = -2
Query: 649 ITFVYFYYYCIVFKVFRVNIISFAF*NLQREVDRAIDIRLMLVLPSQLVVISHCNKTISF 470
+ +YF+Y+ + + +F+ IIS + LQ+++ +A+ I++ + + + + N + +
Sbjct: 209 VQVLYFFYHTVKY-LFKSKIISESTKRLQKQLFKALCIQVTIPTIAIFIPCVYLNTSAAL 267
Query: 469 TFISLMIPNN 440
+ MI NN
Sbjct: 268 DHLD-MIENN 276
>Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical
protein T09E8.4 protein.
Length = 406
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -2
Query: 790 LTMLIAQSNKY-LNKNPTDFTRSCSVWCCVLKVFSALFVSAN*FY--HNVITFVYFYYYC 620
L +L+ + KY K P++F +C W ++ + ++ + F+ F Y
Sbjct: 236 LLILVFNNCKYNFKKAPSNFVLNCQPWGSIVDLPPPRWIQILELVVQFGIPFFILFLYIA 295
Query: 619 IVFKVF 602
++FK+F
Sbjct: 296 VIFKIF 301
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 578 RKRDNVDTKDFKNDTVIIKIDKSNNIMIKL 667
R +D +T FK+D ++K + S IKL
Sbjct: 716 RSKDKKETDAFKHDAKVLKFESSKQTQIKL 745
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,767,442
Number of Sequences: 27780
Number of extensions: 324375
Number of successful extensions: 941
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -