Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0715
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.66 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.1  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 390 LGYYDTLLDNSTLLDVW 340
           L YY T  D +T+LD W
Sbjct: 310 LAYYSTTCDIATILDFW 326


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 609 FFQNALVGIVSFGKSNANDIYPVVLTSISSFTEWILQN 722
           + QN + G++  G S  N       +S +   EW+ QN
Sbjct: 402 YHQNEVGGVIDDGGSGQNQPESPESSSSTPRHEWVAQN 439


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 79  IPTHLESMVPTVRWYCSHQLPLPF 150
           +  HL S   T+ W+  HQ   P+
Sbjct: 122 VVNHLSSDSTTIHWHGHHQKNSPY 145


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 56  PSLVQIEVFLPILNQW 103
           P +  IE ++P+L QW
Sbjct: 496 PLITLIETWMPLLPQW 511


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +2

Query: 131 TNYHYLSTATCFHGEFYDPAYRRI 202
           T  HY      + GE Y+P +  +
Sbjct: 301 TQQHYQMNQNMYPGEMYNPEHTTV 324


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +2

Query: 131 TNYHYLSTATCFHGEFYDPAYRRI 202
           T  HY      + GE Y+P +  +
Sbjct: 249 TQQHYQMNQNMYPGEMYNPEHTTV 272


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +2

Query: 131 TNYHYLSTATCFHGEFYDPAYRRI 202
           T  HY      + GE Y+P +  +
Sbjct: 432 TQQHYQMNQNMYPGEMYNPEHTTV 455


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,506
Number of Sequences: 336
Number of extensions: 4799
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)