Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0715
(761 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 31 0.89
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 31 0.89
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 31 1.2
U80837-5|AAB37901.1| 455|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF067944-4|AAC17670.2| 279|Caenorhabditis elegans Hypothetical ... 29 2.7
U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set (trithorax/... 29 3.6
Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z47073-1|CAA87371.3| 931|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical... 28 8.3
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 300 CEHRTSNTCHPLRPKHPAGCYYPTRCRNTPGYFC 401
C+ +N+C L P+ GC PT CRNT C
Sbjct: 275 CQTGCANSCAQLSPQPTEGC--PTNCRNTCNEVC 306
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 324 CHPLRPKHPAGCYYPTRCRNTPGYFC*SARMG--NYRS--RRQCI*RQ 455
C P+RPK P G P CR PG R G NY + ++CI R+
Sbjct: 102 CEPIRPKCPPGPPGPPGCRGEPGPSGLPGRRGINNYETLPLKKCIWRE 149
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +3
Query: 543 FCAGLVRAGGRDYDNTDLGAPAFFQN-----ALVGIVSFGKSNANDIYPVVLTSISSFTE 707
FCAG + GG D D G P + L G++S+G A P + T ++ +
Sbjct: 196 FCAGYLE-GGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLS 254
Query: 708 WI 713
WI
Sbjct: 255 WI 256
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +3
Query: 300 CEHRTS--NT-CHPLRPKHPAGCYYPTRCRNTPGY 395
CE + NT C P+ K P C+ RC +TPGY
Sbjct: 1863 CEQNAAAHNTDCSPICQKQPNWCHNGGRCLDTPGY 1897
>U80837-5|AAB37901.1| 455|Caenorhabditis elegans Hypothetical
protein F07E5.1 protein.
Length = 455
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 78 YSYPS*INGSNSALVLFSPTTTTFQLL 158
YSYPS I +S +V+ + TTTTF LL
Sbjct: 75 YSYPSPIVLEHSFVVMTTTTTTTFSLL 101
>AF067944-4|AAC17670.2| 279|Caenorhabditis elegans Hypothetical
protein K10C9.3 protein.
Length = 279
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +3
Query: 231 PVKYLMFTCC*PSRIL*GE---LRQGCEHRTSN---TCHPLRPKHPAGCYYPTRCRNTPG 392
P YLMFT P+ + + + + CE + + H L P G Y P CR TP
Sbjct: 22 PFDYLMFTTIYPTAVCRADDDSVPESCEIPSGTPQWSIHGLWPNFENGSY-PQNCRGTPR 80
Query: 393 YF 398
+F
Sbjct: 81 HF 82
>U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 12
protein.
Length = 389
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +3
Query: 339 PKHPAGCYYPTRCRNTPGYFC*SARMGNYRSRRQCI*RQPPQARTHCDQQRKLQGTVKGH 518
PK G T C+ G C + N+ + R+C P+ ++C+ QR + G
Sbjct: 45 PKRKTGLLTVTSCKC--GTDCTTEECSNFANHREC-----PRGCSNCENQRFRKRQFCGV 97
Query: 519 DRVVTDNKFCAGL 557
+ +TDN GL
Sbjct: 98 ETFLTDNGIGHGL 110
>Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical
protein F39B2.3 protein.
Length = 328
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 108 WNH*FKMGRNTSIWTRLGMLANRHRSTEIASSA 10
+NH F+M +T++ T LG+LA R R I + A
Sbjct: 215 FNHIFEMAAHTNLNTDLGLLAPRGRVAVIGNRA 247
>Z47073-1|CAA87371.3| 931|Caenorhabditis elegans Hypothetical protein
ZC506.1 protein.
Length = 931
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 512 LDCSLQFSLLVTMSSSLWRLPSDTLPP*TVVPHPSRSTK---IPWGITTPC 369
LD +++ S L+T+ S+L L + +PP P TK IP G PC
Sbjct: 876 LDLNVENSKLLTVISALSTLKTKPIPPSVFARLPGEITKVRCIPRGEEMPC 926
>AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.23 protein.
Length = 395
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -1
Query: 590 SIVVVAATSPDQTGAEFVISHDAIMTLDCSLQFSLLVTMSSSLWRLPSD 444
SI V Q G +I++ A+ T +C Q + + S + W+ P D
Sbjct: 212 SIWVDRKLQVSQGGTGGLITYGAVDTKNCDAQVNYVALSSKTYWQFPMD 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,149,916
Number of Sequences: 27780
Number of extensions: 451212
Number of successful extensions: 1146
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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