Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0714
(756 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10518| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-26
SB_13648| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 8e-10
SB_9668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_433| Best HMM Match : DUF883 (HMM E-Value=0.75) 30 2.3
SB_23676| Best HMM Match : DUF904 (HMM E-Value=0.44) 29 4.1
SB_8673| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-38) 29 4.1
SB_57610| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_3948| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_3148| Best HMM Match : Keratin_B2 (HMM E-Value=0.26) 28 7.1
SB_7532| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_35700| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_10518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 116 bits (278), Expect = 3e-26
Identities = 54/72 (75%), Positives = 66/72 (91%)
Frame = +1
Query: 508 VQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITR 687
++ Y EF+LAS+LF+ +KE +CSE S+RMTAMD A+KNAGEMIDKLTLT+NRTRQAVITR
Sbjct: 257 IRCYQEFNLASMLFFGMKEQSCSEHSARMTAMDAATKNAGEMIDKLTLTYNRTRQAVITR 316
Query: 688 ELIEIISGAAAL 723
EL+EIISGAAA+
Sbjct: 317 ELVEIISGAAAV 328
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/87 (36%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSD 433
L R GK+++ ++G+ PP F +A+ LA IL +G++F +G + YN F+SVVS+ S
Sbjct: 170 LSRTLGKNMLMSFMDVGKKPPLFCEATFLAQEILDAGFDFNTGDMFYNVFRSVVSFRAST 229
Query: 434 LPLYTKKSIESAS--KLTAYDSLDSDV 508
+Y+ ++ +A+ +++YD LDS+V
Sbjct: 230 KSIYSFDNLNNAASDSMSSYDELDSEV 256
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = +1
Query: 1 AKYTRAERDLKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCG 153
AK+ RAE++LK+AR YG+GA Y++ E+ +DPK L V ++SDRGLCG
Sbjct: 85 AKFGRAEKELKSARAYGDGATALYDKVEIKQESEDPKHLIVVLSSDRGLCG 135
>SB_13648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 61.3 bits (142), Expect = 8e-10
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +1
Query: 628 EMIDKLTLTFNRTRQAVITRELIEIISGAAAL 723
EMIDKLTLT+NRTRQAVITREL+EIISGAAA+
Sbjct: 2 EMIDKLTLTYNRTRQAVITRELVEIISGAAAV 33
>SB_9668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 29.9 bits (64), Expect = 2.3
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = -3
Query: 418 RDHRLELVVNDLSGTKLVSRGEDSSGQLTCVQESRWETS-DLISNTNDVLSVQSLQIPRD 242
R L L +D SGT L+S+ DS ++ + E W T D+ T D + +++ RD
Sbjct: 57 RRRSLLLFGHDRSGTTLLSKMFDSDSRVFGMYEPFWTTHYDMARQTFD----EKVRLARD 112
Query: 241 LSPTQITLMFSAPGS----LRRLRITLD 170
+ ++ FSA + LR+ R LD
Sbjct: 113 VLTGFLSCNFSASENGVDFLRKFRFRLD 140
>SB_433| Best HMM Match : DUF883 (HMM E-Value=0.75)
Length = 386
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Frame = -1
Query: 213 SQHQVR*DGCGSLWIHQCVHSAQTSVRGHSNKQLLGVI---FGRCNLSPF--IELYCTFT 49
+QH++R G +++IH + +A +S++ + Q+L I G+ N SP I+L T T
Sbjct: 295 TQHEIRMKGLEAIFIHCDLLNASSSLKQGAPSQILACIELDKGKINFSPHSPIQLSTTST 354
Query: 48 IGTSSFQVTL 19
SS + ++
Sbjct: 355 DYVSSLRFSI 364
>SB_23676| Best HMM Match : DUF904 (HMM E-Value=0.44)
Length = 591
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = -1
Query: 213 SQHQVR*DGCGSLWIHQCVHSAQTSVRGHSNKQLLGVI---FGRCNLSPF--IELYCTFT 49
+QH++R G +++IH + +A +S+ + Q+L I G+ N SP I+L T
Sbjct: 500 TQHEIRMKGLEAIFIHCDLVNASSSLEQGAPSQILACIELDKGKINFSPHSPIQLRATSV 559
Query: 48 IGTSSFQVTLSTG 10
SS + ++ G
Sbjct: 560 GYVSSLRFSIKDG 572
>SB_8673| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-38)
Length = 719
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = -3
Query: 502 AVQRVVRSQLAGALNRLLSVEGQVGLGVRDHRLELVVNDLSGTKLVSRGEDSSGQLTCVQ 323
AV VR + +RLL +EG V DH +N+ GT + R ++S ++
Sbjct: 654 AVWDTVRLWASRTRHRLLGIEGAVS----DHSGGTTLNNTRGTATLIRVKESRVNNGVIE 709
Query: 322 ESRWETSDL 296
S W S L
Sbjct: 710 ASHWNNSCL 718
>SB_57610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 504
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +3
Query: 216 IKVICVGDKSRGICRDCTESTSLVL---LMRSDVSHLL-SW 326
IK++ GDK G+ RD T+LV L+ S + +LL SW
Sbjct: 284 IKIVSTGDKEPGLSRDLFADTNLVRFVELLDSVIHYLLPSW 324
>SB_3948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = -1
Query: 213 SQHQVR*DGCGSLWIHQCVHSAQTSVRGHSNKQLLGVI---FGRCNLSPF--IELYCTFT 49
+QH+++ G +++IH + SA S++ + Q+L I G+ N SP I+L T
Sbjct: 1021 TQHEIQIKGLEAIFIHCDLVSASGSLKQGAPSQILACIELDKGKINFSPHSPIQLSATSV 1080
Query: 48 IGTSSFQVTLSTG 10
SS + ++ G
Sbjct: 1081 DYVSSLRFSMKDG 1093
>SB_3148| Best HMM Match : Keratin_B2 (HMM E-Value=0.26)
Length = 147
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = -1
Query: 216 CSQHQVR*DGCGSLWIHQCVHSAQTSVRGHSNKQLLGVIFGRCNLSPFIELYCTFT 49
C QHQ + S I+ CV +A TS R Q V N++P ++ T T
Sbjct: 56 CKQHQHQPVCANSTNINPCVQTAPTSTRVCKQHQHQPVCANSTNINPCVQTAPTST 111
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = -1
Query: 216 CSQHQVR*DGCGSLWIHQCVHSAQTSVRGHSNKQLLGVIFGRCNLSPFIELYCTFT 49
C QHQ + S I+ CV +A TS R Q V N++P ++ T T
Sbjct: 27 CKQHQHQPVCVNSTNINPCVQTAPTSTRVCKQHQHQPVCANSTNINPCVQTAPTST 82
>SB_7532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 76 RAEVTPPEDDPKQLFVAMTSDRGLCG 153
RA TPPE K + + S GLCG
Sbjct: 263 RARATPPEVTDKMAILRLPSGLGLCG 288
>SB_35700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 595
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +1
Query: 553 ALKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITREL 693
+L + CS++S + ++N + E ++ +T+ NRT IT+EL
Sbjct: 263 SLIKSYCSKES--VVVLENVTSLINETVNGITVAVNRTAPMNITKEL 307
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,817,517
Number of Sequences: 59808
Number of extensions: 442434
Number of successful extensions: 1316
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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