Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0714
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084158-4|AAK68562.1|  299|Caenorhabditis elegans Hypothetical ...   119   2e-27
AC084158-3|AAL00872.1|  313|Caenorhabditis elegans Hypothetical ...    92   3e-19
AC084158-5|AAO21417.1|  200|Caenorhabditis elegans Hypothetical ...    55   6e-08
AL132902-6|CAC14421.1|  316|Caenorhabditis elegans Hypothetical ...    29   3.6  
AL132952-8|CAB61142.2|  186|Caenorhabditis elegans Hypothetical ...    28   6.2  
U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>AC084158-4|AAK68562.1|  299|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.18a protein.
          Length = 299

 Score =  119 bits (287), Expect = 2e-27
 Identities = 58/72 (80%), Positives = 65/72 (90%)
 Frame = +1

Query: 508 VQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITR 687
           +QSY+E+SLA L++Y +KE A SEQSSRMTAMD ASKNAGEMIDKLTL FNRTRQAVITR
Sbjct: 228 LQSYSEYSLAQLIYYGMKESATSEQSSRMTAMDGASKNAGEMIDKLTLAFNRTRQAVITR 287

Query: 688 ELIEIISGAAAL 723
           ELIEIISGAA +
Sbjct: 288 ELIEIISGAACV 299



 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 44/85 (51%), Positives = 59/85 (69%)
 Frame = +2

Query: 254 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSD 433
           LQRLY   I+   NEIGR PP+F DAS  A AIL SGY+F +G I++N+FK+VVSY  S 
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSK 202

Query: 434 LPLYTKKSIESASKLTAYDSLDSDV 508
           L +   ++I++   L+ YDS+D DV
Sbjct: 203 LQILPLEAIKAKEALSTYDSVDDDV 227



 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
 Frame = +1

Query: 1   AKYTRAERDLKAARPYGEGAVQFYER----AEVTPPEDDPKQLFVAMTSDRGLCG 153
           AKY +AER+LK AR YG GA  F++      E    ++  KQ+ V +TSDRGLCG
Sbjct: 54  AKYAKAERELKGARAYGVGAKTFFDNIDPVVEGVEKQESKKQVLVLITSDRGLCG 108



 Score = 33.1 bits (72), Expect = 0.22
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 156 VHTGVSKVIRNRLSEPGAENIKVICVGDKSR 248
           VH+ + K  +N L+  G + I+V+ +GDKSR
Sbjct: 110 VHSSIVKEAKNILNNAGDKEIRVVAIGDKSR 140


>AC084158-3|AAL00872.1|  313|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.18b protein.
          Length = 313

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 44/85 (51%), Positives = 59/85 (69%)
 Frame = +2

Query: 254 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSD 433
           LQRLY   I+   NEIGR PP+F DAS  A AIL SGY+F +G I++N+FK+VVSY  S 
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSK 202

Query: 434 LPLYTKKSIESASKLTAYDSLDSDV 508
           L +   ++I++   L+ YDS+D DV
Sbjct: 203 LQILPLEAIKAKEALSTYDSVDDDV 227



 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
 Frame = +1

Query: 1   AKYTRAERDLKAARPYGEGAVQFYER----AEVTPPEDDPKQLFVAMTSDRGLCG 153
           AKY +AER+LK AR YG GA  F++      E    ++  KQ+ V +TSDRGLCG
Sbjct: 54  AKYAKAERELKGARAYGVGAKTFFDNIDPVVEGVEKQESKKQVLVLITSDRGLCG 108



 Score = 35.5 bits (78), Expect = 0.041
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = +1

Query: 508 VQSYTEFSLASLLFYALKEGACSE 579
           +QSY+E+SLA L++Y +KE A SE
Sbjct: 228 LQSYSEYSLAQLIYYGMKESATSE 251



 Score = 33.1 bits (72), Expect = 0.22
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 156 VHTGVSKVIRNRLSEPGAENIKVICVGDKSR 248
           VH+ + K  +N L+  G + I+V+ +GDKSR
Sbjct: 110 VHSSIVKEAKNILNNAGDKEIRVVAIGDKSR 140


>AC084158-5|AAO21417.1|  200|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.18c protein.
          Length = 200

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
 Frame = +1

Query: 1   AKYTRAERDLKAARPYGEGAVQFYER----AEVTPPEDDPKQLFVAMTSDRGLCG 153
           AKY +AER+LK AR YG GA  F++      E    ++  KQ+ V +TSDRGLCG
Sbjct: 54  AKYAKAERELKGARAYGVGAKTFFDNIDPVVEGVEKQESKKQVLVLITSDRGLCG 108



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 21/34 (61%), Positives = 23/34 (67%)
 Frame = +2

Query: 254 LQRLYGKHIISVANEIGRLPPTFLDASQLATAIL 355
           LQRLY   I+   NEIGR PP+F DAS  A AIL
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAIL 176



 Score = 33.1 bits (72), Expect = 0.22
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 156 VHTGVSKVIRNRLSEPGAENIKVICVGDKSR 248
           VH+ + K  +N L+  G + I+V+ +GDKSR
Sbjct: 110 VHSSIVKEAKNILNNAGDKEIRVVAIGDKSR 140


>AL132902-6|CAC14421.1|  316|Caenorhabditis elegans Hypothetical
           protein Y71A12B.6 protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 381 ERSFTTSSSLWSRTPSPTCP 440
           E   T S+SLW+ TP P CP
Sbjct: 124 EFDITVSNSLWTFTPVPACP 143


>AL132952-8|CAB61142.2|  186|Caenorhabditis elegans Hypothetical
           protein Y51H4A.8 protein.
          Length = 186

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = -3

Query: 364 SRGEDSSGQLTCVQESRWETSDLISNTNDVLSVQSLQIPRDLSPTQITLMFSAP 203
           S  E  +GQ       R   SD+ S  NDVL   S+ +  D++P  IT  FS P
Sbjct: 45  SLAEFENGQFDQAYAQRVVVSDVQSAINDVLQANSIPL-NDINPPVIT--FSPP 95


>U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical
           protein R05G6.7 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 311 PPTFLDASQLATAILTSGYEFGSGKI 388
           PPTF D  + A  +   GY FG  KI
Sbjct: 3   PPTFADLGKSAKDLFNKGYNFGFLKI 28


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,612,447
Number of Sequences: 27780
Number of extensions: 313123
Number of successful extensions: 1058
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)