Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0714
         (756 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.77 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.4  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 141 RFVRSVHTGVSKVIRNRLSEPG 206
           +F++++H G + +IRN    PG
Sbjct: 564 QFIQNLHAGENTIIRNSQQAPG 585


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -3

Query: 463 LNRLLSVEGQVGLGVRDHRLELVVNDLSGTKLVSRGEDSSGQLTCVQES 317
           L R + V     + + DHR  +    L  + +V   +D S  L CV ++
Sbjct: 215 LTRQVVVSSVANVRIADHRGVMPPVILENSGVVHVAQDESTSLVCVAQA 263


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -3

Query: 463 LNRLLSVEGQVGLGVRDHRLELVVNDLSGTKLVSRGEDSSGQLTCVQES 317
           L R + V     + + DHR  +    L  + +V   +D S  L CV ++
Sbjct: 215 LTRQVVVSSVANVRIADHRGVMPPVILENSGVVHVAQDESTSLVCVAQA 263


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 735 GGLVQGGRTRDDLDELPGDDS 673
           GG+ Q G+ +++ D+   D+S
Sbjct: 73  GGIQQAGKPKEETDDKDDDES 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,582
Number of Sequences: 438
Number of extensions: 3902
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)