Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0710
         (647 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY518688-1|AAR99814.1|  107|Caenorhabditis elegans BET1 protein.       54   9e-08
AC024838-2|AAU87809.1|  107|Caenorhabditis elegans Hypothetical ...    54   9e-08
Z81592-6|CAB04733.2|  431|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF099925-12|AAC69509.1|  257|Caenorhabditis elegans Hypothetical...    27   8.7  

>AY518688-1|AAR99814.1|  107|Caenorhabditis elegans BET1 protein.
          Length = 107

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 23/58 (39%), Positives = 39/58 (67%)
 Frame = +1

Query: 280 IENENERMAEELSGKISSLKYISIELGNEVRDQEKLLRGLDDDVDRSSGFLGKTMGRV 453
           +E  N+ +   LS K+++LK ++I +G++VR+Q +LL  +D+D D S G L  TM R+
Sbjct: 18  LERHNDDLVGGLSSKVAALKRVTIAIGDDVREQNRLLNDMDNDFDSSKGLLQSTMRRL 75


>AC024838-2|AAU87809.1|  107|Caenorhabditis elegans Hypothetical
           protein Y59E9AL.7 protein.
          Length = 107

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 23/58 (39%), Positives = 39/58 (67%)
 Frame = +1

Query: 280 IENENERMAEELSGKISSLKYISIELGNEVRDQEKLLRGLDDDVDRSSGFLGKTMGRV 453
           +E  N+ +   LS K+++LK ++I +G++VR+Q +LL  +D+D D S G L  TM R+
Sbjct: 18  LERHNDDLVGGLSSKVAALKRVTIAIGDDVREQNRLLNDMDNDFDSSKGLLQSTMRRL 75


>Z81592-6|CAB04733.2|  431|Caenorhabditis elegans Hypothetical
           protein T16G1.6 protein.
          Length = 431

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 619 QHIQNLFRNTYNTQE*WMGNENHLNFKIIYNKK 521
           QH+ N   N Y   E W   E  LN KI ++KK
Sbjct: 116 QHLHNREVNFYVLAEKWNKPEELLNAKIFFSKK 148


>AF099925-12|AAC69509.1|  257|Caenorhabditis elegans Hypothetical
           protein K01A2.10 protein.
          Length = 257

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 301 MAEELSGKISSLKYISIELGNEVRDQE-KLLRGLDDDVDR 417
           +  E S  + SL      LGNE+R+++ K L G DD  D+
Sbjct: 78  LQNETSNMLKSLHNEINRLGNELREEKRKTLHGDDDSADK 117


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,540,278
Number of Sequences: 27780
Number of extensions: 251555
Number of successful extensions: 680
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)