Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0710
(647 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g58170.1 68416.m06486 Bet1-like SNARE 1-1 / Bet1 / Sft1-like ... 44 7e-05
At1g13890.1 68414.m01630 SNAP25 homologous protein, putative / s... 32 0.29
At5g61210.1 68418.m07678 SNAP25 homologous protein SNAP33 (SNAP3... 32 0.38
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 29 2.7
At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50... 29 3.5
At2g22125.1 68415.m02628 C2 domain-containing protein contains P... 29 3.5
At5g65570.1 68418.m08250 pentatricopeptide (PPR) repeat-containi... 28 4.7
At1g28490.1 68414.m03503 syntaxin 61 (SYP61) / osmotic stess-sen... 28 4.7
At2g01190.1 68415.m00030 octicosapeptide/Phox/Bem1p (PB1) domain... 28 6.1
At5g57180.2 68418.m07143 expressed protein ; supporting cDNA gi|... 27 8.1
At5g57180.1 68418.m07142 expressed protein ; supporting cDNA gi|... 27 8.1
At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family pr... 27 8.1
>At3g58170.1 68416.m06486 Bet1-like SNARE 1-1 / Bet1 / Sft1-like
SNARE 14a / BS14a (BET11) identical to SP|Q9M2J9
Bet1-like SNARE 1-1 (AtBET11) (Bet1/Sft1-like SNARE 14a)
(AtBS14a) [Mouse-ear cress] {Arabidopsis thaliana};
supporting cDNA gi|14030602|gb|AF368175.1|AF368175
Length = 122
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +1
Query: 283 ENENERMAEELSGKISSLKYISIELGNEVRDQEKLLRGLDDDVDRSSGFLGKTMGR 450
E+ENER E L ++ LK +S ++ EV ++L + +D+D S GFL TM R
Sbjct: 35 EHENERALEGLQDRVILLKRLSGDINEEVDTHNRMLDRMGNDMDSSRGFLSGTMDR 90
>At1g13890.1 68414.m01630 SNAP25 homologous protein, putative /
synaptosomal-associated protein SNAP25-like, putative
(SNAP30) identical to SP|Q9LMG8 Putative SNAP25
homologous protein SNAP30 (AtSNAP30)
(Synaptosomal-associated protein SNAP25-like 3)
{Arabidopsis thaliana}; similar to SP|Q9S7P9 SNAP25
homologous protein SNAP33 (AtSNAP33)
(Synaptosomal-associated protein SNAP25-like 1) (SNAP-25
like protein 1) (Snap25a) {Arabidopsis thaliana};
contains Pfam profile: PF05739 SNARE domain
Length = 263
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 310 ELSGKISSLKYISIELGNEVRDQEKLLRGLDDDVD 414
+LS + LK +++++G+E+ Q K L L DDVD
Sbjct: 210 DLSDILGDLKSMAVDMGSEIDKQNKALDHLGDDVD 244
>At5g61210.1 68418.m07678 SNAP25 homologous protein SNAP33 (SNAP33)
(SNAP33B) / synaptosomal-associated protein SNAP25-like
1 / snap25a identical to SNAP25 homologous protein
SNAP33 (AtSNAP33) (Synaptosomal-associated protein
SNAP25-like 1) (SNAP-25 like protein 1) (Snap25a)
(Swiss-Prot:Q9S7P9) [Arabidopsis thaliana]
Length = 300
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 310 ELSGKISSLKYISIELGNEVRDQEKLLRGLDDDVD 414
+LS + LK +++++G+E+ Q K L L DDVD
Sbjct: 247 DLSDILGELKNMAVDMGSEIEKQNKGLDHLHDDVD 281
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +1
Query: 268 TEDTIENENERMAEELSGKISSLKYISIELGNEVRDQEKLLRGLDDDVDRSS 423
T+ + +E E +++L ++ + I L E++DQ+KLL+ D +D+ S
Sbjct: 249 TKIAVIDEIEDKSKKLEYQVKEQEDIIQRLSMEIKDQKKLLKEQKDAIDKFS 300
>At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50)
identical to DNA repair-recombination protein GI:7110148
from [Arabidopsis thaliana]
Length = 1316
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 283 ENENERMAEELSGKISSLKYISIELGNEVRDQEKLLRGLDD 405
E + ER+AEE S +KY++ LG +++E+LL +D
Sbjct: 902 EEDLERLAEEKSQLDLDVKYLTEALGPLSKEKEQLLSDYND 942
>At2g22125.1 68415.m02628 C2 domain-containing protein contains Pfam
profile PF00168: C2 domain
Length = 309
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -1
Query: 434 PRKPELLSTSSSNPR--KSFSWSLTSLPNSMEMYLS 333
PR+ +++ST NP +SFSWS S P ++++S
Sbjct: 221 PRQTKVISTGP-NPEWDESFSWSFESPPKGQKLHIS 255
>At5g65570.1 68418.m08250 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 738
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 132 LTKDVINQDLIIIITLVSCC*SKRRAE 212
LT +VIN DL++ TL+S C R+ E
Sbjct: 526 LTTEVINPDLVLWRTLLSACKVHRKVE 552
>At1g28490.1 68414.m03503 syntaxin 61 (SYP61) / osmotic
stess-sensitive mutant 1 (OSM1) identical to SP|Q946Y7
Syntaxin 61 (AtSYP61) (Osmotic stess-sensitive mutant 1)
{Arabidopsis thaliana}; identical to cDNA syntaxin of
plants 61 (SYP61) GI:16041649
Length = 245
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/63 (23%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +1
Query: 280 IENENERMAEELSGKISSLKYISIELGNEVRDQEKLLRGLDDDVDRSSG---FLGKTMGR 450
I+ ++E + +ELS + + + + + +E+ QE+++ LD ++D + F+ K +G
Sbjct: 156 IKQQDEEL-DELSKSVQRIGGVGLTIHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGM 214
Query: 451 VLR 459
V++
Sbjct: 215 VMK 217
>At2g01190.1 68415.m00030 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein Pfam profile PF00564: PB1
domain
Length = 720
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2
Query: 184 DTRVMMIIRSWLITSFVRRLFNFGSTCRLFTIKYCL 77
DTR++++ R+ + S + RL N R FT+KY L
Sbjct: 100 DTRIVVVDRNSSLPSLIARLSNTLLDGRSFTLKYQL 135
>At5g57180.2 68418.m07143 expressed protein ; supporting cDNA
gi|13991645|gb|AF359387.1|AF359387
Length = 435
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = -2
Query: 535 IYNKKNTKMRRGIDRKYNSCGSLCQALKLFPWFFQGNLSFCQHHHLIHAKVFLGPLL 365
I +K R+ ++ YN +L +P F NLS Q H F GPLL
Sbjct: 53 ISTRKPRTQRKRPNQTYNEAATLLSTA--YPNIFSSNLSSKQKTHSSSNSHFYGPLL 107
>At5g57180.1 68418.m07142 expressed protein ; supporting cDNA
gi|13991645|gb|AF359387.1|AF359387
Length = 424
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = -2
Query: 535 IYNKKNTKMRRGIDRKYNSCGSLCQALKLFPWFFQGNLSFCQHHHLIHAKVFLGPLL 365
I +K R+ ++ YN +L +P F NLS Q H F GPLL
Sbjct: 53 ISTRKPRTQRKRPNQTYNEAATLLSTA--YPNIFSSNLSSKQKTHSSSNSHFYGPLL 107
>At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family
protein / kinesin motor family protein similar to
kinesin-like protein GB:CAB41097 GI:5541717 from
[Arabidopsis thaliana]; contains Pfam profiles PF00225:
Kinesin motor domain, PF00514:
Armadillo/beta-catenin-like repeat
Length = 894
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 298 RMAEELSGKISSLKYISIELGNEVRDQEKLLRGLDDDVDR 417
++ EE K S K + ++L + + E+ L+ DDDV+R
Sbjct: 407 KIKEEFDYKSLSKK-LEVQLDKVIAENERQLKAFDDDVER 445
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,558,393
Number of Sequences: 28952
Number of extensions: 230078
Number of successful extensions: 675
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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