Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0708
(703 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 141 4e-34
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 141 4e-34
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 141 6e-34
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 0.89
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 30 1.5
11_06_0087 - 19919224-19922304 29 2.7
04_03_1015 - 21734381-21736534 29 2.7
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 3.6
12_02_0513 - 19906147-19906271,19906470-19906791,19907091-199076... 29 4.7
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 4.7
08_02_1424 + 26982502-26983572,26984129-26984908,26988299-26990128 28 6.2
06_03_0124 - 16942492-16945032,16945478-16945572,16945966-169460... 28 6.2
02_05_0202 + 26708049-26709074 28 6.2
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 6.2
11_02_0070 - 8004397-8004645,8004796-8004961,8005039-8005793 28 8.3
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 141 bits (342), Expect = 4e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +1
Query: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 180
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREV 61
Query: 181 LKIVKQRLIKVDGKVRTDPTYPAG 252
+ I+ QR + VDGKVRTD TYPAG
Sbjct: 62 ISILMQRHVLVDGKVRTDKTYPAG 85
Score = 125 bits (302), Expect = 3e-29
Identities = 66/147 (44%), Positives = 82/147 (55%)
Frame = +3
Query: 255 MDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 434
MDV+SI KT E +RL+YD KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRT
Sbjct: 87 MDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRT 146
Query: 435 IRYPDPLIKVNDSIQLDIATTKIMDSSSLSPGTCV*SREAVTWGAWAPSCPARDIPAPST 614
IRYPDP+IK ND+I++D+ T KI+D G V G
Sbjct: 147 IRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFE 206
Query: 615 LCTSRTPRDTPSATRLNNVFIIGKGTK 695
ATRL NVF IGKG K
Sbjct: 207 TIHVEDALGHQFATRLGNVFTIGKGNK 233
Score = 69.7 bits (163), Expect = 2e-12
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = +2
Query: 509 FIKFESGNLCMITGSRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFGNEV 661
FIKF+ GN+ M+TG RN GRVG I +RE+H GSF+ +H++D+ GH F +
Sbjct: 172 FIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRL 222
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 141 bits (342), Expect = 4e-34
Identities = 63/84 (75%), Positives = 72/84 (85%)
Frame = +1
Query: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 180
ARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT EV
Sbjct: 2 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREV 61
Query: 181 LKIVKQRLIKVDGKVRTDPTYPAG 252
+ I+ QR + VDGKVRTD TYPAG
Sbjct: 62 ISILMQRHVLVDGKVRTDKTYPAG 85
Score = 126 bits (304), Expect = 2e-29
Identities = 67/147 (45%), Positives = 82/147 (55%)
Frame = +3
Query: 255 MDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 434
MDV+SI KT E +RL+YD KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRT
Sbjct: 87 MDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRT 146
Query: 435 IRYPDPLIKVNDSIQLDIATTKIMDSSSLSPGTCV*SREAVTWGAWAPSCPARDIPAPST 614
IRYPDPLIK ND+I++D+ T KI+D G V G
Sbjct: 147 IRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFE 206
Query: 615 LCTSRTPRDTPSATRLNNVFIIGKGTK 695
ATRL NVF IGKG K
Sbjct: 207 TIHVEDALGHAFATRLGNVFTIGKGNK 233
Score = 70.1 bits (164), Expect = 2e-12
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = +2
Query: 509 FIKFESGNLCMITGSRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFGNEV 661
FIKF+ GN+ M+TG RN GRVG I +RE+H GSF+ +H++D+ GH F +
Sbjct: 172 FIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRL 222
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 141 bits (341), Expect = 6e-34
Identities = 63/84 (75%), Positives = 71/84 (84%)
Frame = +1
Query: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 180
ARG KKHLKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV
Sbjct: 18 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREV 77
Query: 181 LKIVKQRLIKVDGKVRTDPTYPAG 252
+ I+ QR + VDGKVRTD TYPAG
Sbjct: 78 ISILMQRHVMVDGKVRTDKTYPAG 101
Score = 125 bits (302), Expect = 3e-29
Identities = 68/147 (46%), Positives = 82/147 (55%)
Frame = +3
Query: 255 MDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 434
MDVVSI KT E FRL+YD KGRF +H I E+AK+KLCKV+ V G K +P+L T+DGRT
Sbjct: 103 MDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDGRT 162
Query: 435 IRYPDPLIKVNDSIQLDIATTKIMDSSSLSPGTCV*SREAVTWGAWAPSCPARDIPAPST 614
IRYPDPLIK ND+I++D+ T KI+D G V G
Sbjct: 163 IRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGSFE 222
Query: 615 LCTSRTPRDTPSATRLNNVFIIGKGTK 695
ATR+ NVF IGK K
Sbjct: 223 TIHVEDALGHQFATRMGNVFTIGKERK 249
Score = 71.3 bits (167), Expect = 7e-13
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +2
Query: 509 FIKFESGNLCMITGSRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFGNEV 661
FIKF+ GN+ M+TG RN GRVG I SRE+H GSF+ +H++D+ GH F +
Sbjct: 188 FIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRM 238
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 142 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 41
+G+SPG + RA GD L V+VH T++ W
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = -2
Query: 648 KVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRLPVIIHKFPDSNLMNP*SS 496
K+C V+S S +PG +SRD VP KL +P K P+ P SS
Sbjct: 1554 KLCQVDS---PDSPQPGGISRDADVPKVVKLEVPPESSKEPEQAKKEPASS 1601
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 391 DLRMFRTW*RMMAA-PSAIQTHLSKSTIPSS*TLQLRRL 504
DL R W +A PS HLS ++PSS T Q RRL
Sbjct: 208 DLSSARDWPLAIAMLPSLTALHLSSCSLPSSSTQQWRRL 246
>04_03_1015 - 21734381-21736534
Length = 717
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1
Query: 355 STSCVKSSVWRPDLRMFRTW*RMMAAPSAIQTHLSKSTIPSS 480
S+S V S+V+ LR+ T R +AA I THL+ ST PS+
Sbjct: 38 SSSQVPSAVYASLLRL-ATSHRSLAAARRIATHLASSTAPST 78
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -3
Query: 155 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKR 27
F L ++ + L G G+G Y PPSLSN + AFKR
Sbjct: 35 FNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNA-LVAAFKR 76
>12_02_0513 -
19906147-19906271,19906470-19906791,19907091-19907695,
19908569-19908617
Length = 366
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 114 AQLVGTG*RSRCIHTAK-FVQHPCFGSV*ALQMLLRASR 1
++ V G R+RC+H A V+ P FG + ++L ASR
Sbjct: 39 SRAVKAGRRARCVHHASALVRPPSFGRLAMFVLILSASR 77
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 39 SQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESS----EVCFDRKRSPENCETTP 203
+QS+ V + RCV ETV + P + R+ G+F + + FD+ + +CE P
Sbjct: 894 NQSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>08_02_1424 + 26982502-26983572,26984129-26984908,26988299-26990128
Length = 1226
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 679 IMNTLFNLVAEGVSRGVLDVHNVEG 605
I+ T F LVA+ S+ +++HN+EG
Sbjct: 580 ILTTRFKLVAQHCSKKEMNMHNIEG 604
>06_03_0124 -
16942492-16945032,16945478-16945572,16945966-16946076,
16946142-16946229
Length = 944
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = +1
Query: 55 LDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTD 234
+++L VY T +E P+ I + E L V ++ G R+
Sbjct: 73 VEELSNVYRGAQETNRKLYQELFPIQIMQMCGWLLKVVRWENLNCVH---MEAHGNRRSS 129
Query: 235 PTYPAGLWMLSQLRRLMNC 291
PTY LWM+S L+ C
Sbjct: 130 PTYLVMLWMISVASLLITC 148
>02_05_0202 + 26708049-26709074
Length = 341
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 619 HNVEGAGMSLAGHDGAHAPQVTASRDHTQVPG 524
+ V +G +L GH +H A+ H Q PG
Sbjct: 268 YRVFASGQALGGHKKSHVCSAAAAAAHAQTPG 299
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 291 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 395
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
>11_02_0070 - 8004397-8004645,8004796-8004961,8005039-8005793
Length = 389
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 542 ITGSRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFGNEV 661
+ S + V T+VS + D +HIK STG T N V
Sbjct: 182 VQASAGVAIVDTVVSAPGRSPNTDGIHIKQSTGVTVRNAV 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,993,323
Number of Sequences: 37544
Number of extensions: 506338
Number of successful extensions: 1747
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1745
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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