Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0707
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.3  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.3  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -1

Query: 106 SNLLWAHCKC 77
           +N +W+HC+C
Sbjct: 145 TNTVWSHCQC 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -1

Query: 106 SNLLWAHCKC 77
           +N +W+HC+C
Sbjct: 145 TNTVWSHCQC 154


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 559 NNVLRLCRTHYYLQKVSDSI 500
           +N+  LCR HY L  V   I
Sbjct: 228 DNLYILCRLHYKLTSVMQKI 247


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 559 NNVLRLCRTHYYLQKVSDSI 500
           +N+  LCR HY L  V   I
Sbjct: 228 DNLYILCRLHYKLTSVMQKI 247


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -2

Query: 165 GIEIVINNILDI 130
           GI++V+ N+LDI
Sbjct: 63  GIQLVVRNLLDI 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,426
Number of Sequences: 336
Number of extensions: 3305
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)