Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0707
         (775 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021335-1|AAX33483.1|  421|Drosophila melanogaster RE01655p pro...    29   9.4  
AY051874-1|AAK93298.1|  499|Drosophila melanogaster LD36843p pro...    29   9.4  
AE013599-3985|AAF47294.2|  499|Drosophila melanogaster CG30427-P...    29   9.4  

>BT021335-1|AAX33483.1|  421|Drosophila melanogaster RE01655p
           protein.
          Length = 421

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 583 RKLLMIE*NNVLRLCRTHYYLQKVSDSICLTIIV 482
           RK ++ E    L   R H  +Q+V D +C T+IV
Sbjct: 371 RKFILKEKEEDLPTARVHMKIQRVVDVVCKTVIV 404


>AY051874-1|AAK93298.1|  499|Drosophila melanogaster LD36843p
           protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 583 RKLLMIE*NNVLRLCRTHYYLQKVSDSICLTIIV 482
           RK ++ E    L   R H  +Q+V D +C T+IV
Sbjct: 449 RKFILKEKEEDLPTARVHMKIQRVVDVVCKTVIV 482


>AE013599-3985|AAF47294.2|  499|Drosophila melanogaster CG30427-PB,
           isoform B protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 583 RKLLMIE*NNVLRLCRTHYYLQKVSDSICLTIIV 482
           RK ++ E    L   R H  +Q+V D +C T+IV
Sbjct: 449 RKFILKEKEEDLPTARVHMKIQRVVDVVCKTVIV 482


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,282,237
Number of Sequences: 53049
Number of extensions: 541201
Number of successful extensions: 786
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)