Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0705
         (692 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089228-1|AAL89966.1|  440|Drosophila melanogaster AT02348p pro...    37   0.023
AE014296-2761|AAF49444.1|  440|Drosophila melanogaster CG4169-PA...    37   0.023

>AY089228-1|AAL89966.1|  440|Drosophila melanogaster AT02348p
           protein.
          Length = 440

 Score = 37.1 bits (82), Expect = 0.023
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +1

Query: 511 DQISNNDISQAVSNAAKNKISIGAVGNLAFVPYIDEL 621
           D IS + + +A      +K+++GA+G+LA VPY  +L
Sbjct: 403 DGISQSQVQEAAKKVGSSKLAVGAIGHLANVPYASDL 439



 Score = 36.3 bits (80), Expect = 0.040
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = +2

Query: 251 IHVSYSDNGLFGVVLSV-PKDEXXXXXXXXXXXXXTSLSADAIKAGKNQLKTQVLNEADT 427
           ++ SYSD GLFG V+S   KD               S+S   +  GK  LK ++++   +
Sbjct: 315 VNASYSDAGLFGFVVSADSKDIGKTVEFLVRGLKSASVSDKDVARGKALLKARIISRYSS 374

Query: 428 GSSLAESLAAQGLYTGSVRSA 490
              L + +  Q   T +V  A
Sbjct: 375 DGGLIKEIGRQAALTRNVLEA 395



 Score = 35.9 bits (79), Expect = 0.052
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +3

Query: 12  SDASQAEASTYYGGELRKEIGGDLAHVALAVQGAPAGS 125
           S  S+A ++ +YGG+ RK+  G  A VA+A QGA A +
Sbjct: 232 SGGSKAASANWYGGDARKDTSGHRAVVAVAGQGAAASN 269


>AE014296-2761|AAF49444.1|  440|Drosophila melanogaster CG4169-PA
           protein.
          Length = 440

 Score = 37.1 bits (82), Expect = 0.023
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +1

Query: 511 DQISNNDISQAVSNAAKNKISIGAVGNLAFVPYIDEL 621
           D IS + + +A      +K+++GA+G+LA VPY  +L
Sbjct: 403 DGISQSQVQEAAKKVGSSKLAVGAIGHLANVPYASDL 439



 Score = 36.3 bits (80), Expect = 0.040
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = +2

Query: 251 IHVSYSDNGLFGVVLSV-PKDEXXXXXXXXXXXXXTSLSADAIKAGKNQLKTQVLNEADT 427
           ++ SYSD GLFG V+S   KD               S+S   +  GK  LK ++++   +
Sbjct: 315 VNASYSDAGLFGFVVSADSKDIGKTVEFLVRGLKSASVSDKDVARGKALLKARIISRYSS 374

Query: 428 GSSLAESLAAQGLYTGSVRSA 490
              L + +  Q   T +V  A
Sbjct: 375 DGGLIKEIGRQAALTRNVLEA 395



 Score = 35.9 bits (79), Expect = 0.052
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +3

Query: 12  SDASQAEASTYYGGELRKEIGGDLAHVALAVQGAPAGS 125
           S  S+A ++ +YGG+ RK+  G  A VA+A QGA A +
Sbjct: 232 SGGSKAASANWYGGDARKDTSGHRAVVAVAGQGAAASN 269


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,987,914
Number of Sequences: 53049
Number of extensions: 493479
Number of successful extensions: 1088
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)