Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0705
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical pr... 33 0.15
AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical ... 33 0.15
AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical ... 33 0.15
U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical ... 30 1.8
Z92793-2|CAD56589.1| 684|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z92793-1|CAB07229.1| 681|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z72503-11|CAD56560.1| 684|Caenorhabditis elegans Hypothetical p... 29 2.4
Z72503-10|CAA96601.1| 681|Caenorhabditis elegans Hypothetical p... 29 2.4
L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with... 27 9.6
L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with... 27 9.6
AF125463-4|AAD12862.1| 243|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical
protein T10B10.2 protein.
Length = 422
Score = 35.9 bits (79), Expect = 0.027
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 3 LTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGAPAGSPQ-XXXXXXXXXXXGNGPV 179
+ S +A+ +S Y GGE+R++ AHV +A +GA + + GN
Sbjct: 223 IRSGNAASPSSSAYKGGEVRRDADSKYAHVIVAGEGAAGNNTKALATQAVLLTALGNSSP 282
Query: 180 TKWGADNS-PLAKAIGNIG 233
K+ + +AKA+G G
Sbjct: 283 VKFNTGTTGVIAKAVGQNG 301
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 502 QGFDQISNNDISQAVSNAAKNKISIGAVGNLAFVPYIDEL 621
Q +S +D+ A K+S+ + GN++ VPY+D L
Sbjct: 384 QQIPNVSASDVEVAAKKLT-TKLSLASYGNVSEVPYVDTL 422
>Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 517 ISNNDISQAVSNAAKNKISIGAVGNLAFVPYIDEL 621
++ D++QA+S K+S+ A G+ + VPY+DEL
Sbjct: 391 VTAQDVTQALSRV-NGKLSLAAYGSTSLVPYLDEL 424
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 3 LTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGA 113
L + ++A + Y+GGE RK+ G+ ++VA+A +G+
Sbjct: 236 LAQNQPAKATPAKYFGGEARKDGRGNRSYVAIAGEGS 272
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +2
Query: 251 IHVSYSDNGLFGVVLSVPKDEXXXXXXXXXXXXXTSLSADAIKAGKNQLKTQVLNEADTG 430
++V+Y D+GL GV + + S AD + KN QVL++A
Sbjct: 304 VNVNYQDSGLVGVQFAACNTQ-ITQVTKSIASAIKSAKADGLDNAKNTAAVQVLSDAQHA 362
Query: 431 SSLAESLAAQGL 466
S +A A Q L
Sbjct: 363 SEVALEKATQVL 374
>Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 517 ISNNDISQAVSNAAKNKISIGAVGNLAFVPYIDEL 621
++ D++QA+S K+S+ A G+ + VPY+DEL
Sbjct: 377 VTAQDVTQALSRV-NGKLSLAAYGSTSLVPYLDEL 410
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 3 LTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGA 113
L + ++A + Y+GGE RK+ G+ ++VA+A +G+
Sbjct: 222 LAQNQPAKATPAKYFGGEARKDGRGNRSYVAIAGEGS 258
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +2
Query: 251 IHVSYSDNGLFGVVLSVPKDEXXXXXXXXXXXXXTSLSADAIKAGKNQLKTQVLNEADTG 430
++V+Y D+GL GV + + S AD + KN QVL++A
Sbjct: 290 VNVNYQDSGLVGVQFAACNTQ-ITQVTKSIASAIKSAKADGLDNAKNTAAVQVLSDAQHA 348
Query: 431 SSLAESLAAQGL 466
S +A A Q L
Sbjct: 349 SEVALEKATQVL 360
>AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 517 ISNNDISQAVSNAAKNKISIGAVGNLAFVPYIDEL 621
++ D++QA+S K+S+ A G+ + VPY+DEL
Sbjct: 391 VTAQDVTQALSRV-NGKLSLAAYGSTSLVPYLDEL 424
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 3 LTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGA 113
L + ++A + Y+GGE RK+ G+ ++VA+A +G+
Sbjct: 236 LAQNQPAKATPAKYFGGEARKDGRGNRSYVAIAGEGS 272
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +2
Query: 251 IHVSYSDNGLFGVVLSVPKDEXXXXXXXXXXXXXTSLSADAIKAGKNQLKTQVLNEADTG 430
++V+Y D+GL GV + + S AD + KN QVL++A
Sbjct: 304 VNVNYQDSGLVGVQFAACNTQ-ITQVTKSIASAIKSAKADGLDNAKNTAAVQVLSDAQHA 362
Query: 431 SSLAESLAAQGL 466
S +A A Q L
Sbjct: 363 SEVALEKATQVL 374
>AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 517 ISNNDISQAVSNAAKNKISIGAVGNLAFVPYIDEL 621
++ D++QA+S K+S+ A G+ + VPY+DEL
Sbjct: 377 VTAQDVTQALSRV-NGKLSLAAYGSTSLVPYLDEL 410
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 3 LTSSDASQAEASTYYGGELRKEIGGDLAHVALAVQGA 113
L + ++A + Y+GGE RK+ G+ ++VA+A +G+
Sbjct: 222 LAQNQPAKATPAKYFGGEARKDGRGNRSYVAIAGEGS 258
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +2
Query: 251 IHVSYSDNGLFGVVLSVPKDEXXXXXXXXXXXXXTSLSADAIKAGKNQLKTQVLNEADTG 430
++V+Y D+GL GV + + S AD + KN QVL++A
Sbjct: 290 VNVNYQDSGLVGVQFAACNTQ-ITQVTKSIASAIKSAKADGLDNAKNTAAVQVLSDAQHA 348
Query: 431 SSLAESLAAQGL 466
S +A A Q L
Sbjct: 349 SEVALEKATQVL 360
>U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical
protein F56D2.1 protein.
Length = 471
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Frame = +2
Query: 254 HVSYSDNGLFGVVLSVPKDEXXXXXXXXXXXXX------TSLSADAIKAGKNQLKTQVLN 415
+++Y D GLFG+ + ++ + + + KNQ +T +
Sbjct: 333 NINYKDTGLFGIYFVADAHDLNDTSGIMKSVAHEWKHLASAATEEEVAMAKNQFRTNLYQ 392
Query: 416 EADTGSSLAESLAAQGLYTGSVRSAVDI 499
+T + A A + LYTG++R ++
Sbjct: 393 NLETNTQKAGFNAKELLYTGNLRQLSEL 420
>AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical
protein T24C4.1 protein.
Length = 427
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 514 QISNNDISQAVSNAAKNKISIGAVGNLAFVPYIDEL 621
+I +D+ Q + AA +++I A GN +PY DEL
Sbjct: 393 KIQESDV-QKYTKAAFERLAISAYGNYGRIPYADEL 427
>Z92793-2|CAD56589.1| 684|Caenorhabditis elegans Hypothetical
protein C26C6.5b protein.
Length = 684
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 567 LVLCRIRDSLRDVIIGYLVESLAMSTAERTEPVYKPCAANDSAS 436
LVL +++DS I E+ A AE T YKP A + S
Sbjct: 211 LVLRKMKDSQTRAITKLAAETKAADLAEATSAAYKPAVATNGKS 254
>Z92793-1|CAB07229.1| 681|Caenorhabditis elegans Hypothetical
protein C26C6.5a protein.
Length = 681
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 567 LVLCRIRDSLRDVIIGYLVESLAMSTAERTEPVYKPCAANDSAS 436
LVL +++DS I E+ A AE T YKP A + S
Sbjct: 211 LVLRKMKDSQTRAITKLAAETKAADLAEATSAAYKPAVATNGKS 254
>Z72503-11|CAD56560.1| 684|Caenorhabditis elegans Hypothetical
protein C26C6.5b protein.
Length = 684
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 567 LVLCRIRDSLRDVIIGYLVESLAMSTAERTEPVYKPCAANDSAS 436
LVL +++DS I E+ A AE T YKP A + S
Sbjct: 211 LVLRKMKDSQTRAITKLAAETKAADLAEATSAAYKPAVATNGKS 254
>Z72503-10|CAA96601.1| 681|Caenorhabditis elegans Hypothetical
protein C26C6.5a protein.
Length = 681
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 567 LVLCRIRDSLRDVIIGYLVESLAMSTAERTEPVYKPCAANDSAS 436
LVL +++DS I E+ A AE T YKP A + S
Sbjct: 211 LVLRKMKDSQTRAITKLAAETKAADLAEATSAAYKPAVATNGKS 254
>L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
b protein.
Length = 926
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 528 IIGYLVESLAMSTAERTEPVYKPCAANDS 442
++ +L +SL + TAE EPV K AA S
Sbjct: 412 MVSFLDKSLKLDTAESAEPVVKVIAAASS 440
>L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
a protein.
Length = 960
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 528 IIGYLVESLAMSTAERTEPVYKPCAANDS 442
++ +L +SL + TAE EPV K AA S
Sbjct: 449 MVSFLDKSLKLDTAESAEPVVKVIAAASS 477
>AF125463-4|AAD12862.1| 243|Caenorhabditis elegans Hypothetical
protein Y49F6C.5 protein.
Length = 243
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 634 NTEFTIHLYREQMLSFQQRQLKSCSLPHSRQPARCHYWIS 515
N + +HL ++F R+ + C L S +P+RC + I+
Sbjct: 186 NVDGILHLAHMNEMAFVIRKCEECLLDKSDRPSRCIFKIA 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,880,547
Number of Sequences: 27780
Number of extensions: 238448
Number of successful extensions: 459
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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