Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0702
         (623 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECB14E Cluster: UPI0000ECB14E related cluster; n...    34   3.2  
UniRef50_A0LGY3 Cluster: Putative uncharacterized protein; n=1; ...    34   3.2  
UniRef50_A5AG09 Cluster: Putative uncharacterized protein; n=3; ...    32   9.7  

>UniRef50_UPI0000ECB14E Cluster: UPI0000ECB14E related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECB14E UniRef100 entry -
           Gallus gallus
          Length = 92

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 374 NFQVISESSARCVSELKTHKLEAYAAPGNLDSWR 273
           NF ++S+S++RC+S  K      +  P  LDSWR
Sbjct: 35  NFSLVSQSNSRCLSGWKGGPGAVFGLPAVLDSWR 68


>UniRef50_A0LGY3 Cluster: Putative uncharacterized protein; n=1;
           Syntrophobacter fumaroxidans MPOB|Rep: Putative
           uncharacterized protein - Syntrophobacter fumaroxidans
           (strain DSM 10017 / MPOB)
          Length = 177

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 10/67 (14%)
 Frame = +2

Query: 128 GLLVPRTGCCVLRDSLVWQPTRRGFTFMVSLHP----------PAPVLTQSGHASGITVS 277
           G L+ R          V +P RR F + +S+H           P P L   G+A  + + 
Sbjct: 69  GRLIDRIKAAFTAQPYVIEPLRRAFRWTMSIHSGPLLVAMSREPLPSLAAEGYALYVRIE 128

Query: 278 NCPDFQG 298
           NCP+ +G
Sbjct: 129 NCPELEG 135


>UniRef50_A5AG09 Cluster: Putative uncharacterized protein; n=3;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 1079

 Score = 32.3 bits (70), Expect = 9.7
 Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
 Frame = -3

Query: 294 WKSGQLETVIPLACPDCVNTGAGGCKETIKVKPRRVGCHTRE-----SRSTQQPVLGTNK 130
           W +          C  C+  G    +   +  P   G HT        +S Q  + G NK
Sbjct: 269 WNNNATANAEKPVCQVCMKIGHSADRCYYRYDPSFQGPHTPGFTPSFQKSPQTQIQGGNK 328

Query: 129 PDAQIRSATGFNICTTS 79
           P+ Q+  AT  NIC T+
Sbjct: 329 PNMQVLMATPENICDTN 345


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,476,274
Number of Sequences: 1657284
Number of extensions: 11558020
Number of successful extensions: 27565
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27560
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)