Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0702
         (623 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.4  
AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical prote...    23   7.9  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 300  RPWKSGQLETVIPLACPDC 244
            R WK+GQ+E  + L   DC
Sbjct: 1718 RFWKTGQMEGTVTLLNSDC 1736


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 300  RPWKSGQLETVIPLACPDC 244
            R WK+GQ+E  + L   DC
Sbjct: 1719 RFWKTGQMEGTVTLLNSDC 1737


>AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical protein
           protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/15 (66%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
 Frame = +1

Query: 202 HFYGLFAPP-GTRIN 243
           HFYG F PP G R N
Sbjct: 25  HFYGPFVPPVGFRYN 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,030
Number of Sequences: 2352
Number of extensions: 11876
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)