Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0702
         (623 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006708-23|AAF60414.1|  975|Caenorhabditis elegans Paz/piwi dom...    29   2.0  
Z19154-7|CAE17740.1|  342|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U23170-3|AAC46700.2|  125|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    25   8.2  
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    25   8.2  

>AC006708-23|AAF60414.1|  975|Caenorhabditis elegans Paz/piwi
           domain-containing protein2 protein.
          Length = 975

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 133 IGPQDRLLRTPRFSRMATDPSWLHFYGLFAPPGTRINA-VRARKWDHSLQLSRFPG 297
           I P+D   R  R++R A  P     YG+   PG+++N  V  R  D  + +SR  G
Sbjct: 520 INPRDCKWRPQRYNRSAVAPKVWALYGV-GSPGSQMNRDVMRRFCDEFMNMSRSKG 574


>Z19154-7|CAE17740.1|  342|Caenorhabditis elegans Hypothetical
           protein C40H1.8 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 255 CPDCVNTGAGGCKETIKVKPRRVGCHTRESRSTQQP 148
           CPDCVN+G   C ET +       C+T  +R    P
Sbjct: 20  CPDCVNSGKVWCIETAQC--GATSCNTSINRPLNCP 53


>U23170-3|AAC46700.2|  125|Caenorhabditis elegans Hypothetical
           protein F58F12.2 protein.
          Length = 125

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -2

Query: 601 KSNIRTDW*NKIYSLMRFMQKS*LLFLNYLTFNILKNHTQIL 476
           K +I  D    IYS+ +F+ K    F+NYL +N  K H Q++
Sbjct: 6   KESIYVDRQTAIYSIFKFLFKLFFKFVNYL-WNSHKFHEQLV 46


>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
            protein Y64G10A.7 protein.
          Length = 1651

 Score = 24.6 bits (51), Expect(2) = 8.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 271  CDPTCVPGLR*YGCRGV 221
            CD TC  GL   GC+G+
Sbjct: 972  CDETCDSGLFGAGCKGI 988



 Score = 21.0 bits (42), Expect(2) = 8.2
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -2

Query: 286 WTVGDCDPTCVPG 248
           W+   CD  C PG
Sbjct: 924 WSGKKCDKACAPG 936


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
            protein Y64G10A.7 protein.
          Length = 1651

 Score = 24.6 bits (51), Expect(2) = 8.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 271  CDPTCVPGLR*YGCRGV 221
            CD TC  GL   GC+G+
Sbjct: 972  CDETCDSGLFGAGCKGI 988



 Score = 21.0 bits (42), Expect(2) = 8.2
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -2

Query: 286 WTVGDCDPTCVPG 248
           W+   CD  C PG
Sbjct: 924 WSGKKCDKACAPG 936


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,017,468
Number of Sequences: 27780
Number of extensions: 274338
Number of successful extensions: 628
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)