Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0701
         (450 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   0.93 
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   1.2  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             25   1.6  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   1.6  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   2.2  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   2.8  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         22   8.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         22   8.7  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 0.93
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 75  HYESTDVGPALVEAPIVPSPVHVGH 149
           H    D GPAL  API   P  + H
Sbjct: 145 HPHQRDTGPALFPAPISHRPPPIAH 169


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 430 HDHGGHQGHVTNVHWARGHNGGVSHDH 350
           H H  H G+    +   G +GG +HDH
Sbjct: 124 HHHHHHHGNNGGGNGGGGGSGGNAHDH 150


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 256  LTFDCSGSTLSTGVALAASLMLIRMWTRGV 167
            +T  CS     TGV +  S++L RM   GV
Sbjct: 1159 ITVHCSAGVGRTGVFITLSIVLERMQYEGV 1188


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 67  NVDTTRAQMSVLP*SKLPSSHP 132
           N+ T    + VLP SK+P+S+P
Sbjct: 31  NIRTGANNIGVLPASKMPTSYP 52


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 449 PQWQGQPRPRGTPGTRHQRALG*GPQWRGQPRSQGL 342
           P  QG+  PRG PG   ++ +   P  RG+   +G+
Sbjct: 240 PGPQGEVGPRGFPGRPGEKGVPGTPGVRGERGDKGV 275


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 437 GQPRPRGTPGTRHQRALG*GPQWRGQPRSQG 345
           G P P+G PG R  +    G   RG P   G
Sbjct: 104 GPPGPKGNPGLRGPKGERGGMGDRGDPGLPG 134


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 99  PALVEAPIVPSPVHVGHLVP 158
           PA+ E PI P P+H   L+P
Sbjct: 155 PAIRE-PISPGPIHPAVLLP 173


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 99  PALVEAPIVPSPVHVGHLVP 158
           PA+ E PI P P+H   L+P
Sbjct: 155 PAIRE-PISPGPIHPAVLLP 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 368,093
Number of Sequences: 2352
Number of extensions: 6207
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)