Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0701
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 35 0.031
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 32 0.17
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 32 0.17
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 31 0.29
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 31 0.39
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 31 0.51
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 30 0.89
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 30 0.89
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 30 0.89
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 29 1.6
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 29 1.6
Z50029-1|CAA90340.2| 460|Caenorhabditis elegans Hypothetical pr... 29 2.1
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 2.1
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 3.6
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 27 4.8
U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protei... 27 4.8
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 27 4.8
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 27 4.8
U23523-5|AAC46556.1| 77|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 27 8.3
U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog (hedg... 27 8.3
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 27 8.3
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 34.7 bits (76), Expect = 0.031
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = -3
Query: 430 HDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDHGRNSRLFLT 251
HDHGGH H + H H G HDH + + + +G D+G R F
Sbjct: 32 HDHGGHD-HGGHDHGGHDHGGWGGHDHHDHHHGGWGGHDHDHGNGGGGGDNGWGYRPFTG 90
Query: 250 F 248
F
Sbjct: 91 F 91
Score = 31.9 bits (69), Expect = 0.22
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 427 DHGG--HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDH 278
DHGG H GH H GH+ G HDH G+ G+++ ++ G +DH
Sbjct: 23 DHGGGDHGGHDHGGHDHGGHDHG-GHDHGGWG---GHDHHDHHHGGWGGHDH 70
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -3
Query: 421 GGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDG 296
GGH H H+ G G H H Y+ S + YY G
Sbjct: 195 GGHHHHGGGGHYHGGGGGFHHHHHSSYSGSSSDYSSNNYYGG 236
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 445 NGRVSHDHGGH-QGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDG 296
+G H H H H N H GH+ G ++D+ G++ S G +N+ +DG
Sbjct: 374 HGHDDHGHDSHGHSHDHNEH-DHGHSHGGNNDNHGHSHSAGSDNHHGHSHDG 424
Score = 31.1 bits (67), Expect = 0.39
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 430 HDHGGHQGHVTNVHWARGHNGGVS-HDHRGYTRSLGNNYRARYYDGRISNDHGRN 269
+DHG GH + H + GH+ + HDH G++ N+ + N HG +
Sbjct: 368 NDHGHSHGHDDHGHDSHGHSHDHNEHDH-GHSHGGNNDNHGHSHSAGSDNHHGHS 421
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 445 NGRVSHDHGGH-QGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDG 296
+G H H H H N H GH+ G ++D+ G++ S G +N+ +DG
Sbjct: 392 HGHDDHGHDSHGHSHDHNEH-DHGHSHGGNNDNHGHSHSAGSDNHHGHSHDG 442
Score = 31.1 bits (67), Expect = 0.39
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 430 HDHGGHQGHVTNVHWARGHNGGVS-HDHRGYTRSLGNNYRARYYDGRISNDHGRN 269
+DHG GH + H + GH+ + HDH G++ N+ + N HG +
Sbjct: 386 NDHGHSHGHDDHGHDSHGHSHDHNEHDH-GHSHGGNNDNHGHSHSAGSDNHHGHS 439
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 31.5 bits (68), Expect = 0.29
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 424 HGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDG 296
HGGH G H G +GG H G+ RS + + Y G
Sbjct: 56 HGGHGGSHGGSHGGHGSHGGSYGGHSGHGRSFSTSSGSSGYRG 98
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 31.1 bits (67), Expect = 0.39
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 436 VSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 344
V H GGH GHV H H+G H G
Sbjct: 35 VVHTDGGHHGHVDTHHHEESHHGEHHGGHHG 65
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 30.7 bits (66), Expect = 0.51
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Frame = -3
Query: 448 HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-----HRGYTRSLGNNYRARYYDGRISN 284
H SH H GH H A H+G H H G+ S G+ + A + G
Sbjct: 549 HGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGH-HG 607
Query: 283 DHG 275
+HG
Sbjct: 608 EHG 610
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -3
Query: 448 HNGRVSH-DHGGHQGHVTNVHWARGHNG-GVSHDHRGYTRSLGNNYRARYYDGRISNDHG 275
H+ H +HG H GH H A H+G SH H ++ + ++ ++ HG
Sbjct: 413 HHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHGHHG 472
Query: 274 RN 269
+
Sbjct: 473 EH 474
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Frame = -3
Query: 448 HNGRVSHDHGGHQGHVTNVHWARGHNG-----GVSHDHRG 344
H+G +HG H GH H A H+G G H H G
Sbjct: 515 HHGHHG-EHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHG 553
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = -3
Query: 448 HNGRVSHDHGGHQGHVTNVHWA--RGHNG--GVSHDHRG 344
H+G HG H+ H H GH+G GV H H G
Sbjct: 579 HHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHG 617
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = -3
Query: 448 HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYTRSLGNNYRARYYDGRISNDHGR 272
H+G HG H + H H G H H G+ N++ ++ H +
Sbjct: 669 HHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQHTK 728
Query: 271 NS 266
S
Sbjct: 729 KS 730
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 29.9 bits (64), Expect = 0.89
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -3
Query: 433 SHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNY---RARYYDGRISNDHGRN 269
+HDHG H + H+ G +HDH G++ ++ A + G DHG +
Sbjct: 75 AHDHG----HAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHEDHGHS 128
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 29.9 bits (64), Expect = 0.89
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 430 HDHGGHQGHV-TNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDHGRN 269
H GGH GH+ T+ H H+GG H G+ G +Y + Y HG +
Sbjct: 38 HTDGGHHGHMDTHHHHDSHHHGG---HHGGHH---GGHYESHYESHHHHGHHGHH 86
Score = 29.9 bits (64), Expect = 0.89
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 448 HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 341
H+ SH HGGH G H+ + H H G+
Sbjct: 50 HHHHDSHHHGGHHGGHHGGHYESHYESHHHHGHHGH 85
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.9 bits (64), Expect = 0.89
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 439 RVSHDHGGHQGHVTNVHWARGHNG-GVSHDHRGYTRSLGNNYRARYYDGRISNDHGRNSR 263
R H HGGH GH + G +G G S HRG G + R G HG R
Sbjct: 299 RGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRH--GGHGRHGSRSGSPGGRHGHGGR 356
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -3
Query: 430 HDHGGHQGHVTNVHWARGHNG-GVSHDHRG 344
H HGGH GH + G +G G S HRG
Sbjct: 253 HGHGGHGGHGSRSGSPGGRHGHGGSGHHRG 282
Score = 27.1 bits (57), Expect = 6.3
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = -3
Query: 448 HNGRVSHDH--GGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNN--YRARYYDGRISND 281
H GR H G H H + H RGH G H G++ ++DGR +
Sbjct: 353 HGGRHGPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSR 412
Query: 280 HGRN 269
HG +
Sbjct: 413 HGHH 416
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 427 DHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYR-ARYYDGRISNDHGRN 269
+H Q H ++R N G ++H G R NN R R Y+ R ++++ +N
Sbjct: 46 NHQYQQSHPRRTSFSRDGNTGYYNNHSGNKRQTYNNQRGGRSYNHRGNSNYQQN 99
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 427 DHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYR-ARYYDGRISNDHGRN 269
+H Q H ++R N G ++H G R NN R R Y+ R ++++ +N
Sbjct: 46 NHQYQQSHPRRTSFSRDGNTGYYNNHSGNKRQTYNNQRGGRSYNHRGNSNYQQN 99
>Z50029-1|CAA90340.2| 460|Caenorhabditis elegans Hypothetical
protein ZC504.1 protein.
Length = 460
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -3
Query: 295 RISNDHGRNSRLFLTFD-CSGSTLSTGVALAASLMLIRMWTRGVSCPGTRCPT 140
++ N G+N F T++ C+ ST SL+L R + V+C CPT
Sbjct: 31 KVINCFGKNQNQFETYELCTRFCQSTACLAGQSLLLARD-SSPVNCKDMECPT 82
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = -3
Query: 292 ISNDHGRNSRLFLTFDCSGSTLSTGVALAASLMLIRMWTRGVSCPGTRCPTWTGDGTMGA 113
+SN G ++ LT + ST STGV+ AS I +G S + PT + +
Sbjct: 879 VSNTFGTSTTQGLTSSSAQSTASTGVSTVASSTTI---PQGSSSSSPQSPT-SAQPAQSS 934
Query: 112 STRAGPTSVLS 80
ST A +V S
Sbjct: 935 STSAATVTVSS 945
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -1
Query: 381 GATMAGSATITGATLGPSATITGLGTMMAGSAMITGETA 265
G+T+ G +T++G+T S+ TG T AGS ++G +A
Sbjct: 1021 GSTVTGESTVSGSTASTSSGSTGSST-EAGST-VSGSSA 1057
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = -1
Query: 381 GATMAGSATITGATLGPSAT---ITGLGTMMAGS-AMITGET 268
G+T++GS TG+T P +T TG+ T+ S + I+G T
Sbjct: 766 GSTVSGSTGSTGSTNNPGSTDSSTTGISTVSGSSLSTISGST 807
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 437 GQPRPRGTPGTRHQRALG*GPQWRGQPRSQG 345
GQP P G PG R P GQP G
Sbjct: 225 GQPGPNGQPGPRGPPGQAGSPGGNGQPGGPG 255
>U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protein
75 protein.
Length = 285
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 449 PQWQGQPRPRGTPGTRHQRALG*GPQWRGQPRSQGL 342
P W G+P RG G R L P G+P S GL
Sbjct: 150 PGWPGEPGVRGMNGERGSTGLDGAP---GEPGSPGL 182
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 27.5 bits (58), Expect = 4.8
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Frame = -3
Query: 448 HNGRVSHDHGGH------QGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDGRI 290
+NGR S+ G G TN + + HN +H G R G N + Y +G+
Sbjct: 479 NNGRQSNGSNGRWRGNNRNGATTNGYGYQQHNNRQNHYQNGQQRENGENGHHNHYQNGQS 538
Query: 289 SN 284
SN
Sbjct: 539 SN 540
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 27.5 bits (58), Expect = 4.8
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Frame = -3
Query: 448 HNGRVSHDHGGH------QGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDGRI 290
+NGR S+ G G TN + + HN +H G R G N + Y +G+
Sbjct: 381 NNGRQSNGSNGRWRGNNRNGATTNGYGYQQHNNRQNHYQNGQQRENGENGHHNHYQNGQS 440
Query: 289 SN 284
SN
Sbjct: 441 SN 442
>U23523-5|AAC46556.1| 77|Caenorhabditis elegans Hypothetical
protein F53A9.1 protein.
Length = 77
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = -3
Query: 397 NVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDHGRN 269
+VH GH+ G H H G+ LG+ ++ + HG +
Sbjct: 35 HVHTDGGHHHGHHHHHHGFLHELGHAMTGHHHHHH-GHHHGHH 76
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 26.6 bits (56), Expect = 8.3
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Frame = -3
Query: 445 NGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTR-----SLGNNYRA---RYYDGRI 290
+GR GGHQG+ N + R + S D+ G +R GNN R+ RY
Sbjct: 52 DGRQDSYGGGHQGNHGNSYGRREDDRSHSRDNHGGSRYGERDDRGNNGRSADNRYSQSNY 111
Query: 289 SNDHGRNSR 263
+ D R +
Sbjct: 112 NYDSNRGGQ 120
>U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 9 protein.
Length = 588
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 340 TRSLGNNYRARYYDGRISNDHGRNSR 263
TR+ NNYR+R G + HGRN +
Sbjct: 250 TRNGVNNYRSRNSYGTNNRKHGRNGK 275
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -2
Query: 449 PQWQGQPRPRGTPGTRHQRALG*GPQWRGQPRSQGLH*VPRQ 324
P GQ P+G PG+ GP + G P S+G P Q
Sbjct: 203 PGAPGQAGPQGPPGSSGAPGAPGGPGFPGAPGSKGPSGAPGQ 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,721,579
Number of Sequences: 27780
Number of extensions: 146641
Number of successful extensions: 777
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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