Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0700
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    24   1.4  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    24   1.4  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    24   1.4  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.8  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 650 QRHYHNTVFEYNEILR 603
           +R YH T+FEY E +R
Sbjct: 27  KRGYHVTLFEYREDIR 42


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 650 QRHYHNTVFEYNEILR 603
           +R YH T+FEY E +R
Sbjct: 27  KRGYHVTLFEYREDIR 42


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 650 QRHYHNTVFEYNEILR 603
           +R YH T+FEY E +R
Sbjct: 27  KRGYHVTLFEYREDIR 42


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 257 PPVITQIIIFAGFF 216
           PP++   ++F GFF
Sbjct: 562 PPLVIPFLLFGGFF 575


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 257 PPVITQIIIFAGFF 216
           PP++   ++F GFF
Sbjct: 562 PPLVIPFLLFGGFF 575


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 80  GDGNQSPSGGPCARL 36
           G GN  P GGP + +
Sbjct: 530 GSGNNQPPGGPSSHV 544


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,013
Number of Sequences: 336
Number of extensions: 3700
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)