Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0698
(498 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74041-8|CAA98519.2| 610|Caenorhabditis elegans Hypothetical pr... 34 0.066
DQ482732-1|ABF20555.1| 610|Caenorhabditis elegans SNF-11 protein. 34 0.066
AY529124-1|AAT02634.1| 610|Caenorhabditis elegans GABA transpor... 34 0.066
Z19158-6|CAA79575.2| 615|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z19156-3|CAA79564.2| 615|Caenorhabditis elegans Hypothetical pr... 31 0.61
AF079899-1|AAC83661.1| 615|Caenorhabditis elegans sodium- and c... 31 0.61
Z81565-1|CAB04580.1| 344|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL032632-14|CAO82067.1| 504|Caenorhabditis elegans Hypothetical... 29 2.5
AL032632-13|CAA21587.2| 507|Caenorhabditis elegans Hypothetical... 29 2.5
Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z82272-5|CAB05220.1| 341|Caenorhabditis elegans Hypothetical pr... 28 4.3
AC024826-4|AAF60804.2| 309|Caenorhabditis elegans Hypothetical ... 27 5.7
Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 27 7.6
U97592-2|AAB52870.1| 462|Caenorhabditis elegans Temporarily ass... 27 7.6
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z27079-2|CAA81589.1| 205|Caenorhabditis elegans Hypothetical pr... 27 10.0
>Z74041-8|CAA98519.2| 610|Caenorhabditis elegans Hypothetical
protein T03F7.1 protein.
Length = 610
Score = 33.9 bits (74), Expect = 0.066
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 10 SPYWRMCWGLITPAMMIIVFLYALISYEAL 99
S +W+ CW TP++ V L+ LI Y+ L
Sbjct: 504 SAWWKFCWVFATPSVCFGVLLFGLIKYQPL 533
>DQ482732-1|ABF20555.1| 610|Caenorhabditis elegans SNF-11 protein.
Length = 610
Score = 33.9 bits (74), Expect = 0.066
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 10 SPYWRMCWGLITPAMMIIVFLYALISYEAL 99
S +W+ CW TP++ V L+ LI Y+ L
Sbjct: 504 SAWWKFCWVFATPSVCFGVLLFGLIKYQPL 533
>AY529124-1|AAT02634.1| 610|Caenorhabditis elegans GABA transporter
protein protein.
Length = 610
Score = 33.9 bits (74), Expect = 0.066
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 10 SPYWRMCWGLITPAMMIIVFLYALISYEAL 99
S +W+ CW TP++ V L+ LI Y+ L
Sbjct: 504 SAWWKFCWVFATPSVCFGVLLFGLIKYQPL 533
>Z19158-6|CAA79575.2| 615|Caenorhabditis elegans Hypothetical
protein T23G5.5 protein.
Length = 615
Score = 30.7 bits (66), Expect = 0.61
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 16 YWRMCWGLITPAMMIIVFLYALISYEALLF 105
YW+ CW P +++ + I+Y+AL +
Sbjct: 512 YWKFCWSCAAPFILLSMITSNFINYQALTY 541
>Z19156-3|CAA79564.2| 615|Caenorhabditis elegans Hypothetical
protein T23G5.5 protein.
Length = 615
Score = 30.7 bits (66), Expect = 0.61
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 16 YWRMCWGLITPAMMIIVFLYALISYEALLF 105
YW+ CW P +++ + I+Y+AL +
Sbjct: 512 YWKFCWSCAAPFILLSMITSNFINYQALTY 541
>AF079899-1|AAC83661.1| 615|Caenorhabditis elegans sodium- and
chloride-dependentantidepressant- and cocaine-sensitive
dopamine transporterprotein.
Length = 615
Score = 30.7 bits (66), Expect = 0.61
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 16 YWRMCWGLITPAMMIIVFLYALISYEALLF 105
YW+ CW P +++ + I+Y+AL +
Sbjct: 512 YWKFCWSCAAPFILLSMITSNFINYQALTY 541
>Z81565-1|CAB04580.1| 344|Caenorhabditis elegans Hypothetical
protein K06G5.3 protein.
Length = 344
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1
Query: 216 NEVSSPVLVQCKADGNRYQQNTHDQQQVTSHISGHSS 106
N PVL + +D N Y THDQ GHSS
Sbjct: 14 NSPQDPVLNRQVSDDNEYGGMTHDQWLYVQMYFGHSS 50
>AL032632-14|CAO82067.1| 504|Caenorhabditis elegans Hypothetical
protein Y11D7A.12b protein.
Length = 504
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 175 WKSVPTKYPRSTTGNQPHIRPFLRR 101
WK P +YPR+TT H FL +
Sbjct: 396 WKGEPNRYPRTTTTPTHHFEFFLSK 420
>AL032632-13|CAA21587.2| 507|Caenorhabditis elegans Hypothetical
protein Y11D7A.12a protein.
Length = 507
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 175 WKSVPTKYPRSTTGNQPHIRPFLRR 101
WK P +YPR+TT H FL +
Sbjct: 399 WKGEPNRYPRTTTTPTHHFEFFLSK 423
>Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical
protein H01G02.2 protein.
Length = 323
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 211 FIETLKLSFRSKESWVQDQLANAEPGFHL-KKTRKYYEKNLIP 336
F + LK S KE W++ L EP + + KK+ + +++ +P
Sbjct: 275 FFKRLKASELLKEPWIKQGLPLVEPNYRISKKSTRRNQRDALP 317
>Z82272-5|CAB05220.1| 341|Caenorhabditis elegans Hypothetical
protein F55G11.8 protein.
Length = 341
Score = 27.9 bits (59), Expect = 4.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 199 RTGNFIETLKLSFRSKESWVQDQ 267
++GN+I L L ++SK+ WV Q
Sbjct: 194 QSGNYISNLYLLYQSKKQWVSSQ 216
>AC024826-4|AAF60804.2| 309|Caenorhabditis elegans Hypothetical
protein Y55F3AM.5 protein.
Length = 309
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 6 DVSLLAHVLGSDHASHDDYCIPVRTDFIRSIALRRN 113
D+ +LAHVL + +HDD + + DF L++N
Sbjct: 269 DLKVLAHVLARESINHDDKQVAI--DFFLEKFLKKN 302
>Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical
protein C33G3.6 protein.
Length = 624
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/40 (25%), Positives = 20/40 (50%)
Frame = -1
Query: 171 NRYQQNTHDQQQVTSHISGHSSEEQCFV*NQCVQEYNNHH 52
+++ Q +HDQ S + + +++ + YNNHH
Sbjct: 391 HQHHQQSHDQNSTISSVEYNQYQQKAGSYGRNYHPYNNHH 430
>U97592-2|AAB52870.1| 462|Caenorhabditis elegans Temporarily
assigned gene nameprotein 150, isoform a protein.
Length = 462
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 255 PRFLGAER-KL*SLNEVSSPVLVQCKADGNRYQQNTHD 145
PRFL R K + VS+P++V DG++Y+ ++ D
Sbjct: 6 PRFLSFRRSKRRLITSVSAPLIVMNYHDGHQYELDSKD 43
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 253 WVQDQLANA---EPGFHLKKTRKYYEKNL 330
W QLANA EPG H R Y +KNL
Sbjct: 1761 WRDGQLANATYLEPGVHDLHGRVYEDKNL 1789
>Z27079-2|CAA81589.1| 205|Caenorhabditis elegans Hypothetical
protein T05G5.2 protein.
Length = 205
Score = 26.6 bits (56), Expect = 10.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -3
Query: 373 LPIKLYQTCVIREGLSFSRNTFASSLNESQVLRSPADLGPKIPWSGKKAL 224
LP + TC L R+TFASSL ++ P+ P+ + K+L
Sbjct: 114 LPAPIAATCAPDHSLVDYRSTFASSLAPPVPMQMPSVFSPQPTFPYMKSL 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,585,008
Number of Sequences: 27780
Number of extensions: 236323
Number of successful extensions: 637
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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