Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0697
         (988 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0404 + 3053558-3053939,3054028-3054123,3054217-3054309,305...    29   7.5  
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689...    28   10.0 
09_02_0256 - 6350559-6350573,6351025-6351762                           28   10.0 

>01_01_0404 +
           3053558-3053939,3054028-3054123,3054217-3054309,
           3054432-3054517,3054633-3054896,3055076-3055203,
           3055306-3055401,3055580-3055685,3055778-3055942
          Length = 471

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 505 SLAXFIEWLNRTSGSKVSQYHLVGHSLGGH 594
           S A  + WL R    K   +++ G S GGH
Sbjct: 163 SYAFLVNWLERFPQYKYRDFYIAGESYGGH 192


>09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,
            6899245-6899386,6899951-6900020,6900077-6900216,
            6900291-6900365,6901083-6904723
          Length = 1448

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = -1

Query: 436  AMMTXKSSAWRKAGTSKALKFEVATFLHPCTNIIVRFFSS*LDAFSTXSLXNTRG 272
            ++ T  +S+W+ +G  + L   VATF  P   +         + FS  +L  + G
Sbjct: 868  SLPTSGTSSWKLSGVREPLSINVATFEKPLRKLTFAHLLEATNGFSAETLIGSGG 922


>09_02_0256 - 6350559-6350573,6351025-6351762
          Length = 250

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 601 RXGVRRDCAPRGGTERPWSRWSGSAIR 521
           R  VRR    RG  +RPW RW+ S IR
Sbjct: 93  RRRVRRSYPYRGVRQRPWGRWA-SEIR 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,550,658
Number of Sequences: 37544
Number of extensions: 504752
Number of successful extensions: 1196
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2881826040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)