Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0695
         (684 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0306 + 2499350-2499678,2500041-2500137                           31   0.85 
02_02_0135 + 7096911-7098440                                           29   2.6  
12_01_0372 + 2867471-2867775,2867805-2867901,2868539-2868916           29   3.4  
11_06_0156 + 20748472-20748951                                         29   4.5  
08_02_0866 + 22006822-22006899,22006997-22007080,22007621-220077...    28   6.0  
08_02_1480 + 27401923-27402158,27402847-27402982,27403119-274031...    28   7.9  
01_06_1112 + 34606171-34606266,34607170-34607231,34607932-346080...    28   7.9  

>01_01_0306 + 2499350-2499678,2500041-2500137
          Length = 141

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 603 TLAKPAGWPLWQP*ADPNDVIPI 535
           TL +   WP+WQP  D N ++P+
Sbjct: 119 TLGELMDWPIWQPSQDLNSILPV 141


>02_02_0135 + 7096911-7098440
          Length = 509

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +2

Query: 26  LRSSLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQMHGSYN--MD 199
           LRS LLT  + V++    R  R Q +Q +     +N+       T SN QM   YN  +D
Sbjct: 323 LRSELLTMLQLVSSPFSTRLPRHQFKQISYYHFESNLKPSFDDDTNSNAQMDQKYNQCLD 382

Query: 200 TLHNDVAIIN 229
            + +  A  N
Sbjct: 383 EIQSTTARFN 392


>12_01_0372 + 2867471-2867775,2867805-2867901,2868539-2868916
          Length = 259

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 175 LDIGGGDPGASGEDVSCAKSEGELTSLGSPG 83
           +++ G D   S    SC  S+G  ++ GSPG
Sbjct: 169 MEVDGNDDSDSSSPTSCVSSDGRSSAGGSPG 199


>11_06_0156 + 20748472-20748951
          Length = 159

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 358 CWLPKQHRRSFRSRQPRPKY 299
           CWLP+  RRS R R  R K+
Sbjct: 6   CWLPRACRRSMRHRSCRTKF 25


>08_02_0866 +
           22006822-22006899,22006997-22007080,22007621-22007719,
           22007864-22007908,22008170-22008265,22009150-22009227,
           22009864-22009949,22010038-22010104,22010192-22010254,
           22010332-22010433,22010559-22010663,22010748-22010840,
           22011380-22011468,22012049-22012268,22012816-22012899,
           22013221-22013337,22013399-22013473,22013589-22013675,
           22013766-22013828,22014833-22014949,22015231-22015323,
           22015794-22015919,22015992-22016092,22016917-22016996,
           22017023-22017093,22017200-22017256,22017430-22017573
          Length = 839

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -2

Query: 539 RSVDASAAADVRGPPESPLQVLRPLEPSTQRVEAMI-TLFPNVRAQTALVMTWRLTWRF 366
           RSVDA+ +++V G  +  +   RPLE +   +  +   L P V    A  M   LT+ F
Sbjct: 454 RSVDATTSSNVSGNSDIYVTWYRPLEKTVSCLSKLYHRLEPTVFTGLAQAMASNLTYNF 512


>08_02_1480 +
           27401923-27402158,27402847-27402982,27403119-27403168,
           27403810-27403813,27404394-27404494,27405084-27406305
          Length = 582

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 105 SSPSLLAQLTSSPEAPGSPPP 167
           SS S  +  +SSP AP SPPP
Sbjct: 7   SSTSSSSSASSSPRAPSSPPP 27


>01_06_1112 +
           34606171-34606266,34607170-34607231,34607932-34608019,
           34608104-34608165,34608246-34608342,34608499-34608930,
           34609042-34610061,34610151-34610282,34610354-34610470,
           34610982-34611062,34611321-34611447,34611547-34611592,
           34611663-34611708
          Length = 801

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 536 SVDASAAADVRGPPESPLQVLRPLEPSTQRVEAMITLF 423
           S+D  A  D + PP + +Q  +P EPS       I LF
Sbjct: 473 SIDLFAGFDQQLPPTTSVQQSQPAEPSISSTPQSIDLF 510


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,608,765
Number of Sequences: 37544
Number of extensions: 375461
Number of successful extensions: 1730
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1729
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)