Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0695
(684 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.006
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 38 0.008
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.013
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 37 0.017
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.017
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.017
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 36 0.023
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 36 0.023
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.053
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 35 0.071
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 35 0.071
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.093
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.16
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.22
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.22
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 33 0.22
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 33 0.22
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.28
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.38
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 31 0.66
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.1
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.5
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.0
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 29 2.7
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 29 2.7
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.5
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.5
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 28 6.1
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 28 6.1
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 28 8.1
SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +1
Query: 331 TSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPL 507
+SD + A+ Q+ +V L + C T G V S +C G+ G S C+GDSGGPL
Sbjct: 422 SSDQHTLADKLQQSKVPL--VNYTTCRSTNGATVDENSMICAGGA-GSSACNGDSGGPL 477
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +2
Query: 32 SSLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQMHGSYNMDTLHN 211
+SLLT ++TAAHC T A +TL G + G S ++ H ++M + N
Sbjct: 268 ASLLTPGWALTAAHCL-TLSDDASDYTLVAGAHQRENDGQVFGISKIRKHKGFSMVHVRN 326
Query: 212 DVAII 226
DVA++
Sbjct: 327 DVALL 331
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +2
Query: 17 NFHLRSSLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQ---MHGS 187
NF SL+++T VTAAHC R + Q+ + +G N T NV+ H
Sbjct: 499 NFICGGSLVSSTWVVTAAHC-VARSSNPAQYQIIVGEHNRNVNEVTEETLNVKKVIAHPQ 557
Query: 188 YNMDTLHNDVAII 226
YN L ND+A+I
Sbjct: 558 YNNPRLSNDIALI 570
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRSTCSGDSGG 501
R + ++ N VC R+ +N T C DG G TC GDSGG
Sbjct: 249 RHSAFEIQPNDVCDRSTRHNFNATVTFCAGDGKGGNDTCHGDSGG 293
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 37.5 bits (83), Expect = 0.010
Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Frame = +1
Query: 274 ASGSNNXXXXXXXXXXXXRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIAS-TL 450
+SGS RT S A Q Q L V ++ C RT G V + S ++
Sbjct: 144 SSGSRAQAGARCYITGWGRTVGGGSAAGILQ--QAMLPVAGDSDCQRTNGRLVPVDSRSM 201
Query: 451 CVDGSNGRSTCSGDSGGPLTSAAAEASTDRYHIVRISSR 567
G G+ C GDSGGP R +VRI ++
Sbjct: 202 ICAGGQGKGGCQGDSGGPFVCEEGGKWVLRGALVRIGTK 240
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTFGNNVIIASTLCV--DGSNGRSTCSGDSGGPL 507
+Q + +++ C R +G + S +CV + N S+C GDSGGPL
Sbjct: 465 QQAKVPIVSKEDCKRAYGAIIRPYSHICVGFNTENAASSCQGDSGGPL 512
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 343 ASGANNQQK-RQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPL 507
ASG N K Q S+ +++ + C + N I S LC + G C GDSGGPL
Sbjct: 85 ASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLDAGGIDACQGDSGGPL 140
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPL 507
+Q V+ + CA +T+ G +G S CSGDSGGPL
Sbjct: 457 QQARTPVVDHETCAIKLDKFAADKTTMICAGGSGSSACSGDSGGPL 502
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 343 ASGANNQQK-RQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPL 507
ASG N K Q S+ +++ + C + N I S LC + G C GDSGGPL
Sbjct: 429 ASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLDAGGIDACQGDSGGPL 484
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 36.3 bits (80), Expect = 0.023
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTFGNNVII--ASTLCVDGSNGRSTCSGDSGGPL 507
++ L V +NA C + G + + AS +C G GR C GDSGGPL
Sbjct: 548 QEAELVVASNAKCDKKNGELLPVDDASMVCAGGP-GRGGCQGDSGGPL 594
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 36.3 bits (80), Expect = 0.023
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTFGNNVII--ASTLCVDGSNGRSTCSGDSGGPL 507
++ L V +NA C + G + + AS +C G GR C GDSGGPL
Sbjct: 88 QEAELVVASNAKCDKKNGELLPVDDASMVCAGGP-GRGGCQGDSGGPL 134
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 35.1 bits (77), Expect = 0.053
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 340 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPL 507
A+ G +Q S+ V++ A C + + I S LC G TC GDSGGP+
Sbjct: 834 ASGGTAPDILQQASVPVVSRARCEKAYPGK-IHDSMLCAGLDQGGIDTCQGDSGGPM 889
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 35.1 bits (77), Expect = 0.053
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 340 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTSA 516
++ GA + Q S+ +++ + C I S LC G +C GDSGGPL
Sbjct: 165 SSGGAAPDRLMQASVPLVSKSRCDTGNYTGKIHESMLCAGLEQGGVDSCQGDSGGPL--- 221
Query: 517 AAEASTDRYHIVRISS 564
E + R+H+ ++S
Sbjct: 222 VCEDTNGRWHLEGVTS 237
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 35.1 bits (77), Expect = 0.053
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPL 507
RQ + ++ + C R + T+ G G S C+GDSGGPL
Sbjct: 83 RQSLVPLVDHVTCKRGLKEFYLDEETMMCVGGAGSSACNGDSGGPL 128
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 34.7 bits (76), Expect = 0.071
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTFGNNVIIASTLCVDGS--NGRSTCSGDSGGPL 507
+Q + + ++ C R +G+ + + LC + N C GDSGGPL
Sbjct: 88 QQARIPIASHEDCKRKYGSGIYSYTHLCAGEAKPNAAGACQGDSGGPL 135
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 34.7 bits (76), Expect = 0.071
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 340 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPL 507
A G++ QV + +++ + C+R + + S +C S G +C GDSGGP+
Sbjct: 6 AEGGSSPTVLMQVEVPIVSASTCSRAYSR--LHESMVCAGRASGGIDSCQGDSGGPM 60
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 34.3 bits (75), Expect = 0.093
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 340 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGR-STCSGDSGGPL 507
++ G+ + Q + + T + C R++ I A +C G TC GDSGGPL
Sbjct: 765 SSGGSQPEALNQAVVPLRTRSECERSYPGK-ISADMICAGNPEGGVDTCQGDSGGPL 820
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 340 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTSA 516
A+ G +Q S+ +++ + C + + I +S LC G C DSGGPL S
Sbjct: 248 ASGGDTPDLLQQASVPIVSRSRCDKAYPGK-IDSSMLCAGLDKGGIDACQRDSGGPLVSK 306
Query: 517 AAE 525
E
Sbjct: 307 TGE 309
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +1
Query: 331 TSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPL 507
+SD AN Q+ +VS+ V+ S +C G+ G S C GDSGGPL
Sbjct: 95 SSDMQLLANKLQQSRVSIIENNKCKVKNDCHYKVLDKSMVCAGGA-GSSICHGDSGGPL 152
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 364 QKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGR-STCSGDSGGP 504
Q R ++ V++ + C + + I +C G+ +C GDSGGP
Sbjct: 585 QLRHATIPVLSVSECRANYSGHTINDKVICAGYEGGKIDSCKGDSGGP 632
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 343 ASGANNQQKRQVSLQVITNAVCARTFGNNVI-IASTLCVDGSNGRSTCSGDSGGPL 507
+ GA+ + +Q ++++ A C + ++ST+ G TC GDSGGPL
Sbjct: 352 SGGASPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCAQVPGIDTCQGDSGGPL 407
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 340 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPL 507
++ G+ +QVS+ + + A C ++ N I S +C G C GDSGGP+
Sbjct: 35 SSGGSTPDYLQQVSVPIRSRARCDSSYPNK-IHDSMICAGIDKGGIDACQGDSGGPM 90
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 328 RTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNG--RSTCSGDSGG 501
R +++ G+N Q + S+ ++ C + N I + + G G + TC GDSGG
Sbjct: 1919 RIGESSPGSNVLQ--EASIPLVDQRACEEQYRNLKPITARMRCAGIYGTPKGTCKGDSGG 1976
Query: 502 PL 507
PL
Sbjct: 1977 PL 1978
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 373 QVSLQVITNAVC-ARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTSAAAE 525
++ + +++ VC A N I C GR +C GDSGGPL + A+
Sbjct: 138 ELEVDIVSKEVCNANDSYNGTINDRYFCAGFPQGGRDSCGGDSGGPLVCSNAD 190
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 346 SGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSN--GRSTCSGDSGGPLT 510
SG + +Q+ + ++ +VC + II G N G+ C GDSGGPL+
Sbjct: 126 SGVFSPTLKQLKVPLVNKSVCNSNNSYSGIIHEQFMCAGYNQGGQDGCLGDSGGPLS 182
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +2
Query: 35 SLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTR----VTTSNVQMHGSYNMDT 202
SL+ + +TAAHC ++R + + LG + T + S + H +YN T
Sbjct: 420 SLIHSNWVLTAAHCISSKRPA--EVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSRT 477
Query: 203 LHNDVAII 226
++ND+A++
Sbjct: 478 MYNDIALL 485
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 352 ANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDG--SNGRSTCSGDSGGPL 507
A ++ +Q L + ++ C R +G+ V + LC S+ C+GDSGGPL
Sbjct: 903 AISRHPQQAMLPIASHENCRRKYGD-VSSTAHLCAGEARSDAAGGCNGDSGGPL 955
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPL 507
+Q ++ V+ A C + + I S LC + G C GDSGGP+
Sbjct: 469 QQATVPVVGRARCMKAYRGQ-IHESMLCAGLDAGGVDACQGDSGGPM 514
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLTSAAAEAS 531
+QV L +++ VC N + D R C GDSG P+ + S
Sbjct: 876 KQVQLPFVSHRVCQVNHTNAITKRMRCAGDVMGERDACKGDSGSPIVVKRTDGS 929
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTFGNNVIIASTLCVDG--SNGRSTCSGDSGGPL 507
+Q L + ++ C R +G+ V + LC S+ C+GDSGGPL
Sbjct: 579 QQAMLPIASHENCRRKYGD-VSSTAHLCAGEARSDAAGGCNGDSGGPL 625
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTF--GNNVIIASTLCVDGSNG--RSTCSGDSGGPL 507
++V L ++ ++ C T+ + I C G+ G ++ CSGDSGGPL
Sbjct: 440 QEVGLPLVNHSQCHATYLTASRKITPRMRCA-GTEGVAKAVCSGDSGGPL 488
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTF--GNNVIIASTLCVDGSNG--RSTCSGDSGGPL 507
++V L ++ ++ C T+ + I C G+ G ++ CSGDSGGPL
Sbjct: 689 QEVGLPLVNHSQCHATYLTASRKITPRMRCA-GTEGVAKAVCSGDSGGPL 737
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
Frame = +1
Query: 349 GANNQQKRQVSLQVITNAVCA-RTFGN-NV--------IIASTLCVD--GSNGRSTCSGD 492
G + +Q L+V++N C+ R G+ N+ + + LC G G++ C+GD
Sbjct: 168 GPTANKLQQADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDAGKTGKNGCNGD 227
Query: 493 SGGP 504
SGGP
Sbjct: 228 SGGP 231
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 373 QVSLQVITNAVCARTFGNNVIIASTLCV--DGSNGRSTCSGDSGGPLT 510
+ ++ ++ C + + ++ A+ C + S+ C GDSGGP +
Sbjct: 268 EATVPIVDIQTCRKAHPDYIVTANMFCAGFENSSRGDACQGDSGGPFS 315
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 376 VSLQVITNAVCARTFGNNVIIAST-LCVDGSNG-RSTCSGDSGGPL 507
V + ++++A C + N I T LC G + +C DSGGPL
Sbjct: 183 VMVPLVSHATCNKPLSYNGTIHETALCAGYERGLKDSCEFDSGGPL 228
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRSTCSGDSGG 501
R + V + +C + + T C +G G TC GDSGG
Sbjct: 191 RHTAFTVQPDRICRGSTSYHFNATITFCAGEGKGGNDTCRGDSGG 235
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 373 QVSLQVITNAVCARTFGN-NVIIASTL-CVD-GSNGRSTCSGDSGGPL 507
Q ++ +++ C + + + + ++S + C G+ G C GDSGGPL
Sbjct: 254 QAAVPLVSRDTCQKAYNDLHYKVSSRMRCAGYGAGGIDACQGDSGGPL 301
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 349 GANNQQKRQVSLQVITNAVCARTFGNNVIIA--STLCVDGSNGRSTCSGDSGGP 504
G ++ +Q L V +++ C R V + S +C G G C GDSGGP
Sbjct: 209 GQPSEILQQAMLPVASHSACDRKNSYLVPVEEKSMICAGGM-GMGGCQGDSGGP 261
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +1
Query: 370 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRST---CSGDSGGPLTSAAAEASTDR 540
++ + +++ CA ++ S + G ST C GDSGGP + S R
Sbjct: 1475 QEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGGPF---VCQGSNKR 1531
Query: 541 YHIVRISS 564
++I + S
Sbjct: 1532 WNIQGVVS 1539
>SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 382 LQVITNAVCARTFGNNVIIASTLCVDGSNGRST--CSGDSGGPL 507
L +++NA C R + + V + LC S+ C+GDSGG L
Sbjct: 2 LPLVSNAECQRKY-SKVNAKAHLCACSGQAASSGGCNGDSGGAL 44
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 442 STLCVDGSNGRSTCSGDSGGP 504
S +C G C GDSGGP
Sbjct: 135 SMICAGGQRAAGGCQGDSGGP 155
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = +2
Query: 248 TNTSSAST*PVEATTLLVLGPGLPASEGPPMLLREPTTNKNAK*ASRSLPTPSAPARLET 427
T T + ST TT V G PA+ G P PTT A + + T AP+ E
Sbjct: 315 TTTGAPSTTRAPPTTGAVTTTGAPATTGAPATTVAPTTT-GAPTTTGAPTTTGAPSTTEA 373
Query: 428 M*SLPPPS 451
+ PS
Sbjct: 374 PSTTEAPS 381
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 346 SGANNQQKRQVSLQVITNAVCA--RTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTSA 516
+G+ ++ Q + +++ C+ +++G+ I + LC G +C GDSGGP
Sbjct: 359 AGSTSKVLMQAKVPLVSRDQCSHQQSYGDR-ITENMLCAGMRQGGVDSCQGDSGGPFVCT 417
Query: 517 AAE 525
E
Sbjct: 418 NPE 420
>SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +3
Query: 324 RKDLRC---CFGSQQPTKTPSEPPGHYQRRLRPHVWKQCDHC 440
R++ +C C+G + +P PP RL W+ CD C
Sbjct: 279 RRNHKCNNLCYGCGEQECSPLVPPAEQDHRLE---WQYCDEC 317
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,557,283
Number of Sequences: 59808
Number of extensions: 382162
Number of successful extensions: 1601
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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