Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0694
         (689 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3M7C5 Cluster: Peptidase S8 and S53, subtilisin, kexin...    35   1.6  
UniRef50_Q4MZW5 Cluster: Splicing factor, putative; n=2; Theiler...    35   1.6  
UniRef50_A6VHP6 Cluster: Putative uncharacterized protein precur...    33   6.6  

>UniRef50_Q3M7C5 Cluster: Peptidase S8 and S53, subtilisin, kexin,
           sedolisin; n=1; Anabaena variabilis ATCC 29413|Rep:
           Peptidase S8 and S53, subtilisin, kexin, sedolisin -
           Anabaena variabilis (strain ATCC 29413 / PCC 7937)
          Length = 827

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 21/77 (27%), Positives = 40/77 (51%)
 Frame = -1

Query: 521 VQKSVAAFDNSRLIYLN*GNLAYCIIYKITIKDTRRKLSKLSLAIQFSTQNKNTLFILR* 342
           ++  V  + N ++I ++ GN     IY+  +K  R       +A Q+  QNKN +F++  
Sbjct: 358 IRAFVDQYPNCKVINISLGNAKQ--IYRDGMKQFRLAAKIDEIAYQYQNQNKNIIFVISA 415

Query: 341 FNRYKTLLDHKQL*SKF 291
            N Y   L ++QL +++
Sbjct: 416 GNSYHEELGYEQLRTEY 432


>UniRef50_Q4MZW5 Cluster: Splicing factor, putative; n=2;
           Theileria|Rep: Splicing factor, putative - Theileria
           parva
          Length = 1007

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 23/63 (36%), Positives = 35/63 (55%)
 Frame = +1

Query: 247 VQFEAENVLCK*IIKNFDYNCLWSSKVLYLLNYLKINNVFLFCVENWIARDNFDNLRRVS 426
           VQF  E  L K II   D NCL   ++L +++ L   N++L  VEN I ++N  +L R  
Sbjct: 727 VQFPLEPSLSKIIITAIDLNCL--DELLTIVSVLSSPNIYL--VENTIDKENPSSLEREK 782

Query: 427 LIV 435
            ++
Sbjct: 783 FMI 785


>UniRef50_A6VHP6 Cluster: Putative uncharacterized protein
           precursor; n=1; Methanococcus maripaludis C7|Rep:
           Putative uncharacterized protein precursor -
           Methanococcus maripaludis C7
          Length = 224

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -1

Query: 122 TFHTIATSYIQNLDSRKADYCLV 54
           T+   AT Y+QN D R ADYCL+
Sbjct: 143 TYEEYATKYLQNNDYRNADYCLM 165


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,753,813
Number of Sequences: 1657284
Number of extensions: 11565819
Number of successful extensions: 23903
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23899
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)