Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0694
         (689 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)                30   2.0  
SB_41382| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.7  
SB_27025| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-28)                 28   8.2  

>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
          Length = 784

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 143 NKLKLLHTFHTIATSYIQNLDSRKADYCL-VLCAI 42
           NK KLLH  H+   S I+ L  +  D CL ++C +
Sbjct: 70  NKPKLLHCLHSFCQSCIEGLARKTEDDCLELICPV 104


>SB_41382| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 320

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -3

Query: 483 HLSKLRQ-LGILHNLQNNDQRHASQIIKIISGNPIFDTKQKHIIYLKV 343
           H  KLRQ L I   + N D  HA Q+ K   G      K KH  Y K+
Sbjct: 258 HYYKLRQVLHIATGITNWDSTHAKQLSKACYGVLSVLRKIKHFAYFKL 305


>SB_27025| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-28)
          Length = 675

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = +1

Query: 310 LWSSKVLYLLNYLKINNVFLFCVENWIARDNFDN--LRRVSLIVIL 441
           +W S +L  L YL   NV+++  E ++   + +N  L  ++L++I+
Sbjct: 148 IWGSSLLAPLLYLARGNVYVYQPEKYLCFFSMENPTLNAITLVIII 193


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,027,861
Number of Sequences: 59808
Number of extensions: 364388
Number of successful extensions: 643
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)