Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0694
         (689 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   6.9  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    23   9.1  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   9.1  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -2

Query: 409 YQNYLWQSNFRHKTKTHYLS*GNL-IGIKPYLTINNYNQ 296
           +Q  LW+S+   K KT+ L+         P+L I   NQ
Sbjct: 809 FQRILWRSHSSEKIKTYELNTITYGTASAPFLAIRTLNQ 847


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 7/31 (22%), Positives = 19/31 (61%)
 Frame = +1

Query: 277 K*IIKNFDYNCLWSSKVLYLLNYLKINNVFL 369
           K ++ NFD + +W  +  +++N   ++ ++L
Sbjct: 309 KWMLVNFDCSAMWLKEPYWIVNAFNVDPLYL 339


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 7/31 (22%), Positives = 19/31 (61%)
 Frame = +1

Query: 277 K*IIKNFDYNCLWSSKVLYLLNYLKINNVFL 369
           K ++ NFD + +W  +  +++N   ++ ++L
Sbjct: 340 KWMLVNFDCSAMWLKEPYWIVNAFNVDPLYL 370


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,866
Number of Sequences: 2352
Number of extensions: 13573
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)