Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0694
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X61617-1|CAA43806.1|  411|Drosophila melanogaster neuralized pro...    29   6.0  
S62597-1|AAB27151.1|  753|Drosophila melanogaster neu protein.         29   6.0  
L12218-1|AAA28403.1|  754|Drosophila melanogaster zinc finger pr...    29   6.0  
AY051987-1|AAK93411.1|  753|Drosophila melanogaster LD45505p pro...    29   6.0  
AE014297-865|AAF54330.1|  754|Drosophila melanogaster CG11988-PA...    29   6.0  
AE014297-864|AAF54326.2|  753|Drosophila melanogaster CG11988-PB...    29   6.0  

>X61617-1|CAA43806.1|  411|Drosophila melanogaster neuralized
           protein protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -3

Query: 483 HLSKLRQLGILHNLQNNDQRHASQIIKIISGNPIFDTKQK 364
           HL  L+Q+  LHN      + A+Q++ + S   +  TK K
Sbjct: 32  HLQHLQQMQQLHNAMPTPAQQAAQVLAMESNELLMSTKDK 71


>S62597-1|AAB27151.1|  753|Drosophila melanogaster neu protein.
          Length = 753

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -3

Query: 483 HLSKLRQLGILHNLQNNDQRHASQIIKIISGNPIFDTKQK 364
           HL  L+Q+  LHN      + A+Q++ + S   +  TK K
Sbjct: 32  HLQHLQQMQQLHNAMPTPAQQAAQVLAMESNELLMSTKDK 71


>L12218-1|AAA28403.1|  754|Drosophila melanogaster zinc finger
           protein protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -3

Query: 483 HLSKLRQLGILHNLQNNDQRHASQIIKIISGNPIFDTKQK 364
           HL  L+Q+  LHN      + A+Q++ + S   +  TK K
Sbjct: 32  HLQHLQQMQQLHNAMPTPAQQAAQVLAMESNELLMSTKDK 71


>AY051987-1|AAK93411.1|  753|Drosophila melanogaster LD45505p
           protein.
          Length = 753

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -3

Query: 483 HLSKLRQLGILHNLQNNDQRHASQIIKIISGNPIFDTKQK 364
           HL  L+Q+  LHN      + A+Q++ + S   +  TK K
Sbjct: 32  HLQHLQQMQQLHNAMPTPAQQAAQVLAMESNELLMSTKDK 71


>AE014297-865|AAF54330.1|  754|Drosophila melanogaster CG11988-PA,
           isoform A protein.
          Length = 754

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -3

Query: 483 HLSKLRQLGILHNLQNNDQRHASQIIKIISGNPIFDTKQK 364
           HL  L+Q+  LHN      + A+Q++ + S   +  TK K
Sbjct: 32  HLQHLQQMQQLHNAMPTPAQQAAQVLAMESNELLMSTKDK 71


>AE014297-864|AAF54326.2|  753|Drosophila melanogaster CG11988-PB,
           isoform B protein.
          Length = 753

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -3

Query: 483 HLSKLRQLGILHNLQNNDQRHASQIIKIISGNPIFDTKQK 364
           HL  L+Q+  LHN      + A+Q++ + S   +  TK K
Sbjct: 32  HLQHLQQMQQLHNAMPTPAQQAAQVLAMESNELLMSTKDK 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,100,819
Number of Sequences: 53049
Number of extensions: 514499
Number of successful extensions: 880
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)