Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0694
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58762-2|AAK39302.1|  722|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U58762-1|AAK39301.1|  732|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U58760-4|AAK31462.2|  678|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>U58762-2|AAK39302.1|  722|Caenorhabditis elegans Hypothetical
           protein T27F7.2b protein.
          Length = 722

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3

Query: 447 NLQNNDQRHASQIIKIISGNPIFDTKQKHIIYLKV 343
           NLQNN +  A +I K+  G  IFD +   I   KV
Sbjct: 301 NLQNNFEMWAIKIFKMFMGRNIFDQQDPEITIFKV 335


>U58762-1|AAK39301.1|  732|Caenorhabditis elegans Hypothetical
           protein T27F7.2a protein.
          Length = 732

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3

Query: 447 NLQNNDQRHASQIIKIISGNPIFDTKQKHIIYLKV 343
           NLQNN +  A +I K+  G  IFD +   I   KV
Sbjct: 311 NLQNNFEMWAIKIFKMFMGRNIFDQQDPEITIFKV 345


>U58760-4|AAK31462.2|  678|Caenorhabditis elegans Hypothetical
           protein C27A2.4 protein.
          Length = 678

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -2

Query: 595 CRSEEFCDCRR-NTKSIIRFSDLPIRSKSQLPP 500
           CR E+FCD R    K+     D PI    ++PP
Sbjct: 606 CRGEQFCDMRTFENKAKESRPDRPIHEFCEIPP 638


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,717,065
Number of Sequences: 27780
Number of extensions: 298669
Number of successful extensions: 623
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)