Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0691
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    25   0.79 
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    24   1.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   9.7  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   9.7  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.7  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.7  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
 Frame = -2

Query: 224 RSQFFES*MSLSQHALEMIFCRF----NA-CFNKTTEMWGVSRLKVKFYSFSGRKSLYSS 60
           R++   S + LSQ+ LE+  C+F    NA  F+  +    + ++++       R  + SS
Sbjct: 337 RNEVISSALKLSQNELEITACKFFSIDNALLFSANSTKKLIVKIRIDIDKEDERNEIISS 396

Query: 59  APVFKKSPISLAA 21
           A    +S + + A
Sbjct: 397 ALKLSQSELEITA 409



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 224 RSQFFES*MSLSQHALEMIFCRF 156
           R++   S + LSQ  LE+  C+F
Sbjct: 390 RNEIISSALKLSQSELEITACKF 412


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +2

Query: 242 GDLKRRPLCPLSSSPNDLQPLTPGHFLIGRPLNSYPNENFADRT 373
           GDL ++P      S NDLQ L      I   L  YP+ +F  RT
Sbjct: 31  GDLSKKP------SYNDLQNLKYLERCIKETLRLYPSVHFISRT 68


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 269 PLSSSPNDLQPLTPGHFL 322
           PL+ SP DL P    H +
Sbjct: 191 PLAFSPEDLDPFACTHVI 208


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 624 SSPDVRRPSNSV 589
           S+PDVR PS+S+
Sbjct: 68  STPDVRPPSSSL 79


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 465 PDKNGELLAHRCNWG 509
           P  +  + +H CNWG
Sbjct: 201 PPLSTSMRSHLCNWG 215


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 465 PDKNGELLAHRCNWG 509
           P  +  + +H CNWG
Sbjct: 361 PPLSTSMRSHLCNWG 375


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 465 PDKNGELLAHRCNWG 509
           P  +  + +H CNWG
Sbjct: 361 PPLSTSMRSHLCNWG 375


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 624 SSPDVRRPSNSV 589
           S+PDVR PS+S+
Sbjct: 224 STPDVRPPSSSL 235


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,272
Number of Sequences: 336
Number of extensions: 3833
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)