BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0691
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein. 31 3.0
BC041020-1|AAH41020.1| 162|Homo sapiens pyridoxal (pyridoxine, ... 31 3.0
BC021550-1|AAH21550.1| 162|Homo sapiens chromosome 21 open read... 31 3.0
BC008008-1|AAH08008.1| 162|Homo sapiens chromosome 21 open read... 31 3.0
AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced prote... 31 3.0
AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein. 31 3.0
>U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.
Length = 2798
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = +1
Query: 370 NLQNQGQISTPRVPASTVLEAVDAGVHNTIASPTKMANSWHIAAIGDLV 516
NL+ G IST A+ LEA +A + T AS A S I I DL+
Sbjct: 1750 NLRRSGTISTSAAAAAAALEASNASSYLTSASSLARAYSIVIRQISDLM 1798
>BC041020-1|AAH41020.1| 162|Homo sapiens pyridoxal (pyridoxine,
vitamin B6) kinase protein.
Length = 162
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -3
Query: 646 CHAGTCP**SGRPPPEQLRPLPGTEQ*FVPPSSAWEERFLLLGVPSPQLQRCARSS 479
C + CP RP P LRP F S AW+ L+ +PS +R + SS
Sbjct: 52 CCSHFCP--FPRPGPRSLRPYHKVRSFFHTVSWAWQSLHLVASIPSGPFERISWSS 105
>BC021550-1|AAH21550.1| 162|Homo sapiens chromosome 21 open reading
frame 124 protein.
Length = 162
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -3
Query: 646 CHAGTCP**SGRPPPEQLRPLPGTEQ*FVPPSSAWEERFLLLGVPSPQLQRCARSS 479
C + CP RP P LRP F S AW+ L+ +PS +R + SS
Sbjct: 52 CCSHFCP--FPRPGPRSLRPYHKVRSFFHTVSWAWQSLHLVASIPSGPFERISWSS 105
>BC008008-1|AAH08008.1| 162|Homo sapiens chromosome 21 open reading
frame 124 protein.
Length = 162
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -3
Query: 646 CHAGTCP**SGRPPPEQLRPLPGTEQ*FVPPSSAWEERFLLLGVPSPQLQRCARSS 479
C + CP RP P LRP F S AW+ L+ +PS +R + SS
Sbjct: 52 CCSHFCP--FPRPGPRSLRPYHKVRSFFHTVSWAWQSLHLVASIPSGPFERISWSS 105
>AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced protein
protein.
Length = 2799
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = +1
Query: 370 NLQNQGQISTPRVPASTVLEAVDAGVHNTIASPTKMANSWHIAAIGDLV 516
NL+ G IST A+ LEA +A + T AS A S I I DL+
Sbjct: 1751 NLRRSGTISTSAAAAAAALEASNASSYLTSASSLARAYSIVIRQISDLM 1799
>AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.
Length = 2820
Score = 31.5 bits (68), Expect = 3.0
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = +1
Query: 370 NLQNQGQISTPRVPASTVLEAVDAGVHNTIASPTKMANSWHIAAIGDLV 516
NL+ G IST A+ LEA +A + T AS A S I I DL+
Sbjct: 1773 NLRRSGTISTSAAAAAAALEASNASSYLTSASSLARAYSIVIRQISDLM 1821
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,558,028
Number of Sequences: 237096
Number of extensions: 2510474
Number of successful extensions: 5653
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5650
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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