Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0690
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   1.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.6  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 243 PAGGRQVWFYKGSSVSWAVYFKFKKLQIKER 335
           P GGR VW   G +   A     KK++ K+R
Sbjct: 92  PYGGRLVWTLPGKTKMIAHLKDKKKIRAKKR 122


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 243 PAGGRQVWFYKGSSVSWAVYFKFKKLQIKER 335
           P GGR VW   G +   A     KK++ K+R
Sbjct: 406 PYGGRLVWTLPGKTKMIAHLKDKKKIRAKKR 436


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 243 PAGGRQVWFYKGSSVSWAVYFKFKKLQIKER 335
           P GGR VW   G +   A     KK++ K+R
Sbjct: 639 PYGGRLVWTLPGKTKMIAHLKDKKKIRAKKR 669


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 243 PAGGRQVWFYKGSSVSWAVYFKFKKLQIKER 335
           P GGR VW   G +   A     KK++ K+R
Sbjct: 639 PYGGRLVWTLPGKTKMIAHLKDKKKIRAKKR 669


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/57 (21%), Positives = 23/57 (40%)
 Frame = +2

Query: 446 DGHDSVLGDHGPLAQGHPPAPYLDFNTGSYNVGKDILPECTVVLDTVLNMHVYDWWH 616
           D  ++  G++G   + H   P   F      +   ++ ECT+     +N  +   WH
Sbjct: 462 DSKNNQDGNNGEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWH 518


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/57 (21%), Positives = 23/57 (40%)
 Frame = +2

Query: 446 DGHDSVLGDHGPLAQGHPPAPYLDFNTGSYNVGKDILPECTVVLDTVLNMHVYDWWH 616
           D  ++  G++G   + H   P   F      +   ++ ECT+     +N  +   WH
Sbjct: 354 DSKNNQDGNNGEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWH 410


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 158 VIRALYHTYDVFV 196
           +I  L+HTY+ FV
Sbjct: 119 IIFVLFHTYEAFV 131


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 216 QQKVVRINWPAGGRQVWF 269
           ++  V+IN P    QVWF
Sbjct: 158 EEVAVKINLPESRVQVWF 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,742
Number of Sequences: 336
Number of extensions: 4124
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)