Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0690
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 29 3.4
U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family ... 29 3.4
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p... 29 3.4
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p... 29 3.4
U41555-8|AAL65774.1| 101|Caenorhabditis elegans Nematode specif... 28 5.9
U41555-4|AAY55843.1| 101|Caenorhabditis elegans Nematode specif... 28 5.9
U41555-2|AAU05596.1| 101|Caenorhabditis elegans Nematode specif... 28 5.9
Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z68116-8|CAH60761.1| 101|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z68116-6|CAD54145.1| 101|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z68116-5|CAD54144.1| 101|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical protein
W05B2.4 protein.
Length = 2265
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 47 RESFWRSIYNRYCKNHPN-LPDRLRIENSYQTYGLRQRVIRAL 172
R F RSI N ++H N DR+R+ ++T G QRV+R +
Sbjct: 1968 RVQFQRSIENFLFEHHRNHTKDRVRLFVDWETSGWVQRVMRVI 2010
>U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family
protein 2, isoform c protein.
Length = 975
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 665 RPPCTLASCYQNVGIWGATSRKRACSELCPK 573
R C +A+C QN GIW + CS +C K
Sbjct: 852 RRSCNVATC-QNDGIWSLWNEWSDCSRVCGK 881
>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
protein 2, isoform a protein.
Length = 1020
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 665 RPPCTLASCYQNVGIWGATSRKRACSELCPK 573
R C +A+C QN GIW + CS +C K
Sbjct: 852 RRSCNVATC-QNDGIWSLWNEWSDCSRVCGK 881
>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
protease protein.
Length = 1020
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 665 RPPCTLASCYQNVGIWGATSRKRACSELCPK 573
R C +A+C QN GIW + CS +C K
Sbjct: 852 RRSCNVATC-QNDGIWSLWNEWSDCSRVCGK 881
>U41555-8|AAL65774.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 7 protein.
Length = 101
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 104 VNLGDFYSTCCIWISKTTHASSERRSFCLY 15
VN G+ Y+ C WIS TH + + C++
Sbjct: 30 VNGGESYAYCSPWISFATHTNKTCYNLCVH 59
>U41555-4|AAY55843.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 3 protein.
Length = 101
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 104 VNLGDFYSTCCIWISKTTHASSERRSFCLY 15
VN G+ Y+ C WIS TH + + C++
Sbjct: 30 VNGGESYAYCSPWISFATHTNKTCYNLCVH 59
>U41555-2|AAU05596.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 1 protein.
Length = 101
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 104 VNLGDFYSTCCIWISKTTHASSERRSFCLY 15
VN G+ Y+ C WIS TH + + C++
Sbjct: 30 VNGGESYAYCSPWISFATHTNKTCYNLCVH 59
>Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical
protein F08G5.7 protein.
Length = 401
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 56 FWRSIYNRYCKNHPNLPDRLRIENSYQTYGLRQRVIRALY 175
F + + +C + ++ D LR + + GLRQ+ RA+Y
Sbjct: 7 FSHFVIHTFCNTNDHIEDFLRNKTAEDIIGLRQQYHRAIY 46
>Z68116-8|CAH60761.1| 101|Caenorhabditis elegans Hypothetical
protein F42F12.10 protein.
Length = 101
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 104 VNLGDFYSTCCIWISKTTHASSERRSFCLY 15
VN G+ Y+ C WIS TH + + C++
Sbjct: 30 VNGGESYAFCSPWISFATHRNKTCYNLCVH 59
>Z68116-6|CAD54145.1| 101|Caenorhabditis elegans Hypothetical
protein F42F12.9 protein.
Length = 101
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 104 VNLGDFYSTCCIWISKTTHASSERRSFCLY 15
VN G+ Y+ C WIS TH + + C++
Sbjct: 30 VNGGESYAFCSPWISFATHRNKTCYNLCVH 59
>Z68116-5|CAD54144.1| 101|Caenorhabditis elegans Hypothetical
protein F42F12.8 protein.
Length = 101
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 104 VNLGDFYSTCCIWISKTTHASSERRSFCLY 15
VN G+ Y+ C WIS TH + + C++
Sbjct: 30 VNGGESYAFCSPWISFATHRNKTCYNLCVH 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,344,302
Number of Sequences: 27780
Number of extensions: 385368
Number of successful extensions: 1084
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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