Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0689
(758 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 171 2e-42
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 171 2e-42
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 171 2e-42
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 171 2e-42
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 167 4e-41
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 113 7e-25
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 2e-18
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 34 0.48
M83664-1|AAA59837.1| 258|Homo sapiens HLA-DPB1 protein. 31 4.5
M28200-1|AAA53195.1| 258|Homo sapiens MHC class II lymphocyte a... 31 4.5
BT019780-1|AAV38583.1| 258|Homo sapiens major histocompatibilit... 31 4.5
BC013184-1|AAH13184.1| 258|Homo sapiens HLA-DPB1 protein protein. 31 4.5
AY804143-1|AAW78748.1| 258|Homo sapiens MHC class II antigen pr... 31 4.5
AY804133-1|AAW78738.1| 258|Homo sapiens MHC class II antigen pr... 31 4.5
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 31 4.5
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 31 4.5
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 31 4.5
AY804141-1|AAW78746.1| 258|Homo sapiens MHC class II antigen pr... 31 6.0
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 171 bits (417), Expect = 2e-42
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = +3
Query: 252 SGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVL 431
+GRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVL
Sbjct: 53 AGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVL 112
Query: 432 VTAIINSGPREDSTRIGRAGTVRRQALMFHP 524
V AIINSGPREDSTRIGRAGTVRRQA+ P
Sbjct: 113 VNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 118 bits (283), Expect = 3e-26
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = +2
Query: 536 NQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 706
NQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 148 NQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
Score = 78.2 bits (184), Expect = 3e-14
Identities = 33/45 (73%), Positives = 40/45 (88%)
Frame = +1
Query: 121 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 255
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSA
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSA 53
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 171 bits (417), Expect = 2e-42
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = +3
Query: 252 SGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVL 431
+GRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVL
Sbjct: 53 AGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVL 112
Query: 432 VTAIINSGPREDSTRIGRAGTVRRQALMFHP 524
V AIINSGPREDSTRIGRAGTVRRQA+ P
Sbjct: 113 VNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 118 bits (283), Expect = 3e-26
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = +2
Query: 536 NQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 706
NQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 148 NQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
Score = 78.2 bits (184), Expect = 3e-14
Identities = 33/45 (73%), Positives = 40/45 (88%)
Frame = +1
Query: 121 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 255
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSA
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSA 53
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 171 bits (417), Expect = 2e-42
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = +3
Query: 252 SGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVL 431
+GRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVL
Sbjct: 53 AGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVL 112
Query: 432 VTAIINSGPREDSTRIGRAGTVRRQALMFHP 524
V AIINSGPREDSTRIGRAGTVRRQA+ P
Sbjct: 113 VNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 114 bits (274), Expect = 4e-25
Identities = 54/57 (94%), Positives = 56/57 (98%)
Frame = +2
Query: 536 NQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 706
NQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSN YAIKK+DELERVAKSNR
Sbjct: 148 NQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNFYAIKKRDELERVAKSNR 204
Score = 78.2 bits (184), Expect = 3e-14
Identities = 33/45 (73%), Positives = 40/45 (88%)
Frame = +1
Query: 121 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 255
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSA
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSA 53
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 171 bits (417), Expect = 2e-42
Identities = 82/91 (90%), Positives = 85/91 (93%)
Frame = +3
Query: 252 SGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVL 431
+GRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVL
Sbjct: 53 AGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVL 112
Query: 432 VTAIINSGPREDSTRIGRAGTVRRQALMFHP 524
V AIINSGPREDSTRIGRAGTVRRQA+ P
Sbjct: 113 VNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 118 bits (283), Expect = 3e-26
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = +2
Query: 536 NQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 706
NQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 148 NQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
Score = 78.2 bits (184), Expect = 3e-14
Identities = 33/45 (73%), Positives = 40/45 (88%)
Frame = +1
Query: 121 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 255
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSA
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSA 53
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 167 bits (406), Expect = 4e-41
Identities = 80/91 (87%), Positives = 83/91 (91%)
Frame = +3
Query: 252 SGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVL 431
+GRYA FRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVL
Sbjct: 53 AGRYAANAFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVL 112
Query: 432 VTAIINSGPREDSTRIGRAGTVRRQALMFHP 524
V AIINSGPREDSTRIGRAGTVRRQA+ P
Sbjct: 113 VNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 118 bits (283), Expect = 3e-26
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = +2
Query: 536 NQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 706
NQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 148 NQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
Score = 78.2 bits (184), Expect = 3e-14
Identities = 33/45 (73%), Positives = 40/45 (88%)
Frame = +1
Query: 121 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 255
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSA
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSA 53
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 113 bits (272), Expect = 7e-25
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +2
Query: 542 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 706
AIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 55
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 2e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +3
Query: 285 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 440
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 34.3 bits (75), Expect = 0.48
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 348 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 256
C C + ++ E G R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
>M83664-1|AAA59837.1| 258|Homo sapiens HLA-DPB1 protein.
Length = 258
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +1
Query: 79 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 255
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++ S
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF--DSD 70
Query: 256 AGMHTSVSV--KPSAQSWSA 309
G +V+ +P+A+ W++
Sbjct: 71 VGEFRAVTELGRPAAEYWNS 90
>M28200-1|AAA53195.1| 258|Homo sapiens MHC class II lymphocyte
antigen beta chain protein.
Length = 258
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +1
Query: 79 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 255
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++ S
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF--DSD 70
Query: 256 AGMHTSVSV--KPSAQSWSA 309
G +V+ +P+A+ W++
Sbjct: 71 VGEFRAVTELGRPAAEYWNS 90
>BT019780-1|AAV38583.1| 258|Homo sapiens major histocompatibility
complex, class II, DP beta 1 protein.
Length = 258
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +1
Query: 79 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 255
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++ S
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF--DSD 70
Query: 256 AGMHTSVSV--KPSAQSWSA 309
G +V+ +P+A+ W++
Sbjct: 71 VGEFRAVTELGRPAAEYWNS 90
>BC013184-1|AAH13184.1| 258|Homo sapiens HLA-DPB1 protein protein.
Length = 258
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +1
Query: 79 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 255
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++ S
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF--DSD 70
Query: 256 AGMHTSVSV--KPSAQSWSA 309
G +V+ +P+A+ W++
Sbjct: 71 VGEFRAVTELGRPAAEYWNS 90
>AY804143-1|AAW78748.1| 258|Homo sapiens MHC class II antigen
protein.
Length = 258
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +1
Query: 79 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 255
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++ S
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF--DSD 70
Query: 256 AGMHTSVSV--KPSAQSWSA 309
G +V+ +P+A+ W++
Sbjct: 71 VGEFRAVTELGRPAAEYWNS 90
>AY804133-1|AAW78738.1| 258|Homo sapiens MHC class II antigen
protein.
Length = 258
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +1
Query: 79 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 255
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++ S
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF--DSD 70
Query: 256 AGMHTSVSV--KPSAQSWSA 309
G +V+ +P+A+ W++
Sbjct: 71 VGEFRAVTELGRPAAEYWNS 90
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 348 CHCSDRASLESL*GAPRLGTGLYGNACVH 262
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 348 CHCSDRASLESL*GAPRLGTGLYGNACVH 262
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 348 CHCSDRASLESL*GAPRLGTGLYGNACVH 262
C C + ++ E G R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158
>AY804141-1|AAW78746.1| 258|Homo sapiens MHC class II antigen
protein.
Length = 258
Score = 30.7 bits (66), Expect = 6.0
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +1
Query: 79 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 255
VA ++V S+ Q PE ++ GR CY + L+ YI +++YA++ S
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNRQEYARF--DSD 70
Query: 256 AGMHTSVSV--KPSAQSWSALQTL 321
G +V+ +P+A+ W++ + L
Sbjct: 71 VGEFRAVTELGRPAAEYWNSQKDL 94
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,701,279
Number of Sequences: 237096
Number of extensions: 2185147
Number of successful extensions: 4680
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4672
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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