Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0689
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   158   3e-39
AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical...    29   2.7  
Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  158 bits (384), Expect = 3e-39
 Identities = 75/91 (82%), Positives = 82/91 (90%)
 Frame = +3

Query: 252 SGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVL 431
           +GR+  +RFRKA CPIVERL NSLMMHGRNNGKKLM VRIVKHAFEII+LLTGENP+QVL
Sbjct: 59  AGRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVL 118

Query: 432 VTAIINSGPREDSTRIGRAGTVRRQALMFHP 524
           V A+INSGPREDSTRIGRAGTVRRQA+   P
Sbjct: 119 VNAVINSGPREDSTRIGRAGTVRRQAVDVAP 149



 Score =  117 bits (282), Expect = 8e-27
 Identities = 55/57 (96%), Positives = 57/57 (100%)
 Frame = +2

Query: 536 NQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 706
           NQAIWLLCTGAREAAFRN+KTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 154 NQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 210



 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 29/43 (67%), Positives = 33/43 (76%)
 Frame = +1

Query: 127 AADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSA 255
           A + PE+ LFG+WS   V VSD+SL DYI VKEK AKYLPHSA
Sbjct: 17  ATEAPEVALFGKWSLQSVNVSDISLVDYIPVKEKSAKYLPHSA 59


>AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical
           protein T24C4.7 protein.
          Length = 798

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = +3

Query: 444 INSGPREDSTRIGRAGTVRRQALMFHPCAESTKQSGFCAQV----HVRLHSEILKQSQSV 611
           I S  + D T +G       + L+F  C  + + S FC ++    H R HS   +  +S 
Sbjct: 562 IESSQKYDLTAMGDIARESSRCLLFRNCLCTNQMSRFCCKLVGREHCRFHSVYPENDESY 621

Query: 612 LQMN 623
            +M+
Sbjct: 622 AKMD 625


>Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical
           protein C26C6.8 protein.
          Length = 273

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 534 STKQSGFCAQVHVRLHSEILKQSQSVLQ 617
           S  QSGF    HV++  EIL+Q+  V++
Sbjct: 178 SDNQSGFVPSSHVKIPHEILQQASRVIK 205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,231,269
Number of Sequences: 27780
Number of extensions: 363224
Number of successful extensions: 1039
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)