Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0688
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z70287-4|CAA94297.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 29 4.5
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 29 4.5
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 29 4.5
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 386 GDPGASGEDVSCAKSEGELTSLGSPGPP 303
G+PGA G+D K +GE G PGPP
Sbjct: 201 GEPGAPGKDGE--KGKGEPGPAGPPGPP 226
>Z70287-4|CAA94297.1| 299|Caenorhabditis elegans Hypothetical
protein R09E10.6 protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 66 QKSPSNSTTTSRSVSPGPRVLDAPRKPLTSTVPGLWVVL 182
++ PS + T ++ P V+D+P P+TS+ GL VL
Sbjct: 157 RQQPSKNVETMTAIEP-VEVMDSPTSPVTSSNSGLITVL 194
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 236 SSVRSQVQQDGGEHQRLRQNHPQSWYRRSQRLPRRV*DSRPGGY 105
S SQ + DG +HQ + PQ Y + + + + P GY
Sbjct: 351 SKRNSQNEDDGQQHQHQNEQQPQQGYHQQDFVSNPLWNQMPVGY 394
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 236 SSVRSQVQQDGGEHQRLRQNHPQSWYRRSQRLPRRV*DSRPGGY 105
S SQ + DG +HQ + PQ Y + + + + P GY
Sbjct: 351 SKRNSQNEDDGQQHQHQNEQQPQQGYHQQDFVSNPLWNQMPVGY 394
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 285 VTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQMHGSYNMDTLHNDVAII 452
VTAAHC + Q R F N + + +H YN T ND+A++
Sbjct: 77 VTAAHC--ALQLQTRSFVYVREPKN--NRERSFSVKEAYIHSGYNNQTADNDIALL 128
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 45 RWRPWSWQKSPSNSTTTSRSVSPGPRVLDAPRKPLTSTVPG 167
R RP + +++ + +TTT SVS P++ D P +V G
Sbjct: 259 RGRPSNKRQTTTTTTTTITSVSKSPQISDTNTLPTLPSVTG 299
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 386 GDPGASGEDVSCAKSEGELTSLGSPGPP 303
G+PGA G+ A S GE G PGPP
Sbjct: 122 GNPGADGD----AGSPGEAGGAGPPGPP 145
>Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical
protein F53C11.5c protein.
Length = 830
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 81 NSTTTSRSVSPGPRVLDAPRKPLTSTVP 164
+S TT + +P P+ L +PR P TS P
Sbjct: 447 SSATTLTAQAPPPQALTSPRTPSTSASP 474
>Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical
protein F53C11.5b protein.
Length = 891
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 81 NSTTTSRSVSPGPRVLDAPRKPLTSTVP 164
+S TT + +P P+ L +PR P TS P
Sbjct: 508 SSATTLTAQAPPPQALTSPRTPSTSASP 535
>Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical
protein F53C11.5a protein.
Length = 855
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 81 NSTTTSRSVSPGPRVLDAPRKPLTSTVP 164
+S TT + +P P+ L +PR P TS P
Sbjct: 472 SSATTLTAQAPPPQALTSPRTPSTSASP 499
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 386 GDPGASGEDVSCAKSEGELTSLGSPGPP 303
G+PGA G+ A S GE G PGPP
Sbjct: 122 GNPGADGD----AGSPGEAGGAGPPGPP 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,251,018
Number of Sequences: 27780
Number of extensions: 299719
Number of successful extensions: 1418
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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