Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0687
         (733 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    25   0.73 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   3.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.9  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   5.2  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   5.2  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   5.2  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   6.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   6.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.8  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 287 HPWVRRHHGTATASHVLAMTGVAFHHLVGGLEACV 183
           H W+RR+       H    TG    H+VGGL   +
Sbjct: 181 HGWMRRNVLNKQHVHFHDYTGSVVIHVVGGLTGLI 215


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 646 RLPHPRLQRSP 614
           R PHPRL+R P
Sbjct: 110 RPPHPRLRREP 120



 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 646 RLPHPRLQRSP 614
           R PHPRL+R P
Sbjct: 136 RPPHPRLRREP 146


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 499 VRQGAFVHWYVGEGMEEGEFSEAREDLAALEKDY 600
           +++G+FV  YVGE +   E  +  ++  A  + Y
Sbjct: 516 IKKGSFVTQYVGEVITNEEAEKRGKEYDAAGRTY 549


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 437 LSNTTAIAEAWARLDHKFD 493
           L+NT  +   W  LD+ FD
Sbjct: 32  LTNTLNVIHKWKYLDYDFD 50


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 349 NRFQGRYQLPA 381
           NRF G Y++PA
Sbjct: 435 NRFSGEYEIPA 445


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 310 QNQAYYPIRRLVSNRFQGRYQ 372
           Q +A+Y +R   +N FQ +YQ
Sbjct: 17  QAKAHYSLRDFKANIFQVKYQ 37


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -1

Query: 661 WLSTLRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSA 518
           ++S  R PHPRL+R        P   +P      R   PP+P  R  A
Sbjct: 104 YISQPRPPHPRLRRE-AEPEAEPGNNRPVYIPQPR---PPHPRLRREA 147



 Score = 21.8 bits (44), Expect = 6.8
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -1

Query: 661 WLSTLRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSA 518
           ++S  R PHPRL+R        P   +P      R   PP+P  R  A
Sbjct: 160 YISQPRPPHPRLRRE-AEPEAEPGNNRPVYIPQPR---PPHPRLRREA 203


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 251 LLLYRGDVVPKDVNAAIAT 307
           +++Y G  V  D+NA IAT
Sbjct: 318 MMMYLGTPVMPDLNALIAT 336


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 278 VRRHHGTATASHVLAMTGVAFHH 210
           ++RHH      H L  T V  HH
Sbjct: 138 LQRHHHLQNHHHHLQSTAVQDHH 160


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,826
Number of Sequences: 438
Number of extensions: 5104
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)