Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0686
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    26   0.24 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.2  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 347 YDDTRPNLVQPNDISL 394
           YDD R  L+ PND+S+
Sbjct: 187 YDDLRDQLLMPNDVSI 202



 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 511 RLWTNGATPEVLN 549
           ++WT G+ P+V N
Sbjct: 444 QIWTTGSDPQVRN 456


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 43  FPKKSSPTSLKISTKM*IPQISVLYLVGRR 132
           +P K     L I TKM + Q+S  +   RR
Sbjct: 111 YPTKGEKIMLAIITKMTLTQVSTWFANARR 140


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 253 PTHHGGHSRRRYELDHSGIHFGIDRMVQL 339
           P H  GHS R   ++  G H  +  ++++
Sbjct: 533 PFHLHGHSFRVVAMERVGSHVNVSEILKM 561


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 323 TEWYNYPTYDDTRPNLVQ 376
           T WY++PT     P+L +
Sbjct: 28  TPWYDFPTNQKYYPSLAK 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,344
Number of Sequences: 336
Number of extensions: 3981
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)