Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0686
(662 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 54 8e-08
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 54 1e-07
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 52 6e-07
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 50 2e-06
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 49 4e-06
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 48 5e-06
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 48 5e-06
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 48 9e-06
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 48 9e-06
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 46 2e-05
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 46 2e-05
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 46 3e-05
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 46 3e-05
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 45 6e-05
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 44 8e-05
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 44 1e-04
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 43 2e-04
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 43 3e-04
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 43 3e-04
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 42 3e-04
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 42 4e-04
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.001
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 39 0.003
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 39 0.004
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 38 0.006
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.006
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.007
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 38 0.007
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 36 0.022
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.051
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.12
SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11) 34 0.12
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_45214| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 31 1.1
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.9
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_21211| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 29 2.6
SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24) 29 2.6
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 29 3.4
SB_54471| Best HMM Match : PHD (HMM E-Value=4.9e-08) 29 4.5
SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29) 29 4.5
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 29 4.5
SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.9
SB_43681| Best HMM Match : MAM (HMM E-Value=2.5e-20) 28 7.8
SB_31967| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-39) 28 7.8
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = +3
Query: 90 VDTTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVA 254
V ++ RIV G A PG P A LR T G CGGS++H WV+TAAHC++
Sbjct: 384 VSSSTSRIVGGAAANPGDWPWQAQLRT---TTGFPYCGGSLIHSNWVLTAAHCIS 435
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 54.4 bits (125), Expect = 8e-08
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
RIV G +A PG P A LR GG F CGG++VH +WVITAAHCV
Sbjct: 139 RIVGGTKAPPGAWPWQAMLR--SNYGGQF-CGGTLVHPQWVITAAHCV 183
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAD 257
RIV G +A G+ P A L P G CGG++VH +WV+TA+HC+ D
Sbjct: 210 RIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCIND 259
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 380 NDISLLRLHRPVVFTRYLQPIRVQSSADAF 469
ND++L+RL +P + TRY+QP+ + +F
Sbjct: 307 NDVALIRLAKPAIRTRYVQPVCLADGTVSF 336
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +3
Query: 99 TNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVADAS 263
T R++ G +A PG P AL+ + G F CGGS+V WV+TAAHCVA +S
Sbjct: 473 TQSRVIGGKDAIPGAWPWQIALK----SRGNFICGGSLVSSTWVVTAAHCVARSS 523
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
RIV G + G +P H +R GG ACGGS++ +WV+TAAHCV
Sbjct: 107 RIVGGHDTVKGAYPWHVLIRK----GGHVACGGSLISEKWVLTAAHCV 150
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +3
Query: 93 DTTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
D+ + R+VSG +AT G+ P A L V P G F CGGS++ +WV+TA HC+
Sbjct: 56 DSASSRVVSGDDATLGEWPWQAWLH-VTPHG--FVCGGSLIAPQWVLTAGHCI 105
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFA-CGGSIVHREWVITAAHCVA 254
R+++G +AT P +LRM+ G + CGGS++ EWV+TAAHCVA
Sbjct: 37 RVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVA 86
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
RIV G EA P A LR GG CGGS++H EWV+TAAHC+
Sbjct: 259 RIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHCL 303
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
RIV G EA P A LR GG CGGS++H EWV+TAAHC+
Sbjct: 219 RIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHCL 263
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVA 254
RIV G A G P A LR T G CGGS++H +WV+TA HCV+
Sbjct: 663 RIVGGTAAKQGDWPWQAQLRS---TSGFPFCGGSLIHPQWVLTATHCVS 708
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 186 GVFACGGSIVHREWVITAAHCVADAS 263
G F CGGS+V WV+TAAHC+A +S
Sbjct: 89 GSFICGGSLVSPTWVVTAAHCIAGSS 114
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = +3
Query: 99 TNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHC 248
T RIV G EA PG P AL M G CGGS+V+ WV+TA HC
Sbjct: 50 TRKRIVGGVEAAPGAWPWQVALLM----NGTQFCGGSLVNENWVVTARHC 95
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +3
Query: 84 KDVDTTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHC 248
+D RIV G EA G P AA+ + G F CGG+++ R+WV+TAAHC
Sbjct: 715 RDSSDKRFRIVGGREAKAGAWPWLAAIYVK----GSFRCGGALIARDWVVTAAHC 765
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 75 DINKDVDTTNLRIVSGWEATPGQHPHHAALRM--VDPTGGVFACGGSIVHREWVITAAHC 248
+ +K + LRI G ++ PG +P AL F CGG+++ +WV+TAAHC
Sbjct: 1149 ETSKPTNHKRLRIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
Query: 249 V 251
V
Sbjct: 1209 V 1209
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = +3
Query: 99 TNLR--IVSGWEATPGQHPHHAALRMVDPTGGVFA-CGGSIVHREWVITAAHC 248
TNLR IV G EA G P + D +G CGG++++REWV+TAAHC
Sbjct: 121 TNLRARIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHC 173
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVA--DASRW 269
R++SG EA G+ P A L + TG F CGGS+V WV+TAAHC+ DAS++
Sbjct: 31 RVISGSEALLGEWPWQAWLHL-QHTG--FICGGSLVAPGWVLTAAHCILSDDASKY 83
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/50 (48%), Positives = 29/50 (58%)
Frame = +3
Query: 102 NLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
N RIV G A G P A LR + G CGG++VH WV+TA+HCV
Sbjct: 246 NSRIVGGTTAQRGAWPWQAMLRYYN---GNHFCGGTLVHPRWVVTASHCV 292
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
R+VSG E P P L + CGG+++ REWV+TAAHCV
Sbjct: 43 RVVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHCV 90
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVADAS 263
RIV G A P A LR T G CGGS++H +W++TA HCV+ S
Sbjct: 53 RIVGGTAAKQNSWPWQAQLRT---TSGFPYCGGSLIHPQWILTATHCVSGKS 101
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAD 257
RIV G A PG P L + +G F CGG++V EWVITAAHCV D
Sbjct: 630 RIVGGSTAPPGAWPWQVML--IYNSGRQF-CGGTLVTPEWVITAAHCVVD 676
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +2
Query: 263 TVVIRAGVTNLTTPEYISEST----EWYNYPTYDDTRPNLVQPNDISLLRLHRPVVFTRY 430
++ +R G + T+P+ E +N+P Y + + NDI+LLRL RP + T
Sbjct: 681 SIQVRLGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKRS---SNDIALLRLSRPTILTHR 737
Query: 431 LQPIRVQSSADAFRNYDGLTVYASG 505
+ + + F N G Y +G
Sbjct: 738 INLACMPNDTVHFPN--GTMCYITG 760
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV-ADASRW 269
RI+ G +T QHP A+ M+D ACGGS+V +W++TAAHC ++ RW
Sbjct: 40 RIMGGQRSTIEQHPWMVAM-MLDSAQ---ACGGSLVPEDWIVTAAHCFDSNRLRW 90
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +3
Query: 102 NLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
N RIV G A G P A LR T G CGGS++ +W++TA HCV
Sbjct: 8 NTRIVGGTAAKHGDWPWQAQLRT---TSGFPYCGGSLIAPQWILTATHCV 54
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRM-VDPTGGVFACGGSIVHREWVITAAHCV 251
RIV G A P A L+ +D T CGGS+++REWV+TAAHC+
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDDT---IVCGGSLINREWVVTAAHCI 477
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +3
Query: 96 TTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHC 248
T RIV G E+ G P AAL + G CGGS++ +WV+TAAHC
Sbjct: 22 TRKRRIVGGIESANGAWPWQAALFL---NGTHHRCGGSVIKSQWVVTAAHC 69
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVADASRWSF 275
R+++G A P P +LR P G +CGG+++ WV+TA+HCV R S+
Sbjct: 29 RVINGQNAQPHSWPWQISLR---PYGRYHSCGGTLISDRWVVTASHCVHKNPRPSY 81
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVADASRWS 272
RIV+G EA P A+LR CG +++ W ITAAHCV +++
Sbjct: 325 RIVNGQEAVSHSWPWIASLRK--GRSNYHTCGATLIRPGWAITAAHCVMRPDKYT 377
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 338 YPTYDDTRPNLVQPNDISLLRLHRPVVFTR 427
+P YDD + NDI+LL L RPV F R
Sbjct: 160 HPEYDDRKIK----NDIALLELSRPVKFDR 185
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 102 NLRIVSGWEATPGQHPHHAALRMVDP--TGGVFACGGSIVHREWVITAAHCVA 254
N RIV G A G P ++ V T CGGS+V EW++TAAHC A
Sbjct: 101 NTRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFA 153
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
RI++G A P P +LR G CGGS++ WV+TAAHC+
Sbjct: 105 RIINGQNAQPHSWPWQISLR---GRSGFHTCGGSLISDRWVVTAAHCI 149
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAA 242
RI++G A P P +LR G CGGS++ WV+TAA
Sbjct: 428 RIINGQNAQPHSWPWQISLR---GRSGFHTCGGSLISDRWVVTAA 469
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAD 257
R+V+G A P +LR+ G CGGS++ EWV+TAAHCV D
Sbjct: 80 RVVNGDNAAQHSWPWQISLRV----NGRHICGGSLITPEWVLTAAHCVED 125
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
R+V+G A P +LR T G CGGS++ EWV+TAAHCV
Sbjct: 37 RVVNGANAPQHAWPWQISLR----TNGQHICGGSLITPEWVLTAAHCV 80
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
RI+ G A P P A + + CGG+++ EWV+TAAHCV
Sbjct: 284 RIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCV 331
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAD 257
R++ G A P P ++ M G + +CGG+++ +WVITAAHCV +
Sbjct: 476 RVIGGEAARPYSWPWQVSVSM----GKLHSCGGALISSKWVITAAHCVIE 521
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
R+V+G A P +LR+ G CGGS++ ++WV+TAAHCV
Sbjct: 31 RVVNGDNAQQHSWPWQISLRV----NGRHICGGSLIAKDWVVTAAHCV 74
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 105 LRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
+RIV G EA P P ++R+ G CGGS++ W++TAAHCV
Sbjct: 29 VRIVGGDEAVPHSWPWQVSIRLK----GSHICGGSLLSPLWLLTAAHCV 73
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
RIV G EA P A L + P G F CGGS++ WV+TAAHC+
Sbjct: 29 RIVGGTEAPINGWPWQAML-LRSPNGDQF-CGGSLIDPGWVLTAAHCL 74
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHC 248
R+V G EA GQ P AL CGG++VH WV+T AHC
Sbjct: 28 RVVGGDEAKAGQFPWQIALLFKRQQ----YCGGALVHERWVVTGAHC 70
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +2
Query: 275 RAGVTNLTTPEYISESTEWYNYPTYDDTRPNLVQPNDISLLRLHRPVVFTRYLQPIRVQS 454
R GV ++T E+ W+ T DT P DI+L+ L RPVVF ++QPI +
Sbjct: 100 RRGVKSITVHEHYKSM--WFEGIT--DTPPMF----DIALIELDRPVVFNFHVQPICIMR 151
Query: 455 SADAFRNYDGLTVYASGH 508
+F+ + GH
Sbjct: 152 PNISFKWNTACFISGWGH 169
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 523 NGATPEVLNWVYLRAVANPTC--ALNFGTLITPNAICARF 636
NG+ P VLN+V + V++ TC L++ I A+CA +
Sbjct: 173 NGSQPNVLNFVMVPLVSHATCNKPLSYNGTIHETALCAGY 212
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVADASRWSFAP 281
RIV G EA+P P L + G CGGS++ ++WV+T+ HC D +++ P
Sbjct: 249 RIVGGREASPNSWPWQVDLVV---NGTRHNCGGSLIDKQWVVTSGHCF-DQRPYAYIP 302
Score = 30.3 bits (65), Expect = 1.5
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +3
Query: 198 CGGSIVHREWVITAAHC 248
CGGS++ W++T++HC
Sbjct: 15 CGGSLIDPYWILTSSHC 31
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVADAS 263
RI++G EA P P +LR+ G CG S++ W +TAAHCV +S
Sbjct: 85 RIINGEEAVPNSWPWQLSLRVY----GSHNCGASLLSPGWALTAAHCVQRSS 132
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
R++ G +A P P +LR+ G CGG+++ +WV+TA HCV
Sbjct: 435 RVIGGEDAAPHSWPWQISLRV----RGKHMCGGTLISPDWVLTAGHCV 478
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVF-ACGGSIVHREWVITAAHCVAD 257
RI++G A P P +LR G F CGG+++ WV+TA+HC+ D
Sbjct: 845 RIINGQNAQPHSWPWQISLRQ----GRRFHLCGGALISDRWVVTASHCIHD 891
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
RI+SG +A P P + ++ G CGG++V +WV+TAAHCV
Sbjct: 351 RIISGSDAQPNSWPW---MVQINYNNG-HHCGGTLVSPQWVVTAAHCV 394
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
RIV G A P A LR G CGG++VH +V+TA+HC+
Sbjct: 23 RIVGGTAAPKNAWPWQAQLRSAS---GFPFCGGTLVHPRFVVTASHCI 67
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 111 IVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAD 257
I+ G A G+ P ++++ + + CGG+++ WV+TAAHCV D
Sbjct: 546 IMGGANAEHGEWPWQVSMKL-NSSSLPHICGGNVISPWWVLTAAHCVQD 593
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 383 DISLLRLHRPVVFTRYLQPIRVQSS 457
D +LL+L RP+ FT+Y+QP+ + S
Sbjct: 637 DYALLKLTRPLNFTQYVQPVCLPDS 661
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 38.7 bits (86), Expect = 0.004
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 198 CGGSIVHREWVITAAHCV 251
CGGSIV+ +W++TAAHCV
Sbjct: 1809 CGGSIVNSQWIVTAAHCV 1826
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +3
Query: 111 IVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVADASR 266
I+ G +A G+ P +L + G V CGG+++ EWV+TAA C D R
Sbjct: 258 IIGGTDAAVGEWPWQVSLYLTH-YGPV--CGGTLLTSEWVLTAARCFRDNKR 306
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHC 248
RIV G EA P + + P CGGS++ W++T++HC
Sbjct: 245 RIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHC 291
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 150 HHAALRMVDPTGGVFACGGSIVHREWVITAAHCVADASRWSFAP 281
+HA + +V G CGGS++ ++WV+T+ HC D +++ P
Sbjct: 546 YHAQVDLV-VNGTRHNCGGSLIDKQWVVTSGHCF-DQRPYAYIP 587
Score = 35.1 bits (77), Expect = 0.051
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 198 CGGSIVHREWVITAAHCV 251
CGGSI+ WV+TA HCV
Sbjct: 10 CGGSIIDPHWVVTAGHCV 27
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 96 TTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
T LRIV+G +A P P + R G CG S++ W +TAAHC+
Sbjct: 236 TPPLRIVNGEDAVPHSWPWQLSFRYK----GSHICGASLLTPGWALTAAHCL 283
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 108 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCVAD 257
RIV G ++ G P AL + D C GS++ W+ITA HC D
Sbjct: 53 RIVGGVVSSEGLWPWQVALLLNDRQ----VCAGSLIEARWIITAGHCFKD 98
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 87 DVDTTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHCV 251
+ D NL GW+ AL + C G++V +EW++T AHC+
Sbjct: 656 EADLANLAATPGWQPAHANSWPWTALLHFGGFLDIEGCMGTLVDQEWIMTTAHCL 710
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 35.1 bits (77), Expect = 0.051
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 186 GVFACGGSIVHREWVITAAHCV 251
G CGGS++ WV+TAAHCV
Sbjct: 336 GHHICGGSLLSSTWVLTAAHCV 357
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2
Query: 380 NDISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASGHVVSG 520
+DI+L+RL +PV FT Y++PI + S+A +Y L SG +SG
Sbjct: 209 SDIALIRLAQPVTFTDYVKPICLPSAAS---DYAQLQANVSG-TISG 251
>SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11)
Length = 439
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +2
Query: 254 RRITVVIRAGVTNLTTPEYISESTEWYNYPTYDDTRPNLVQPNDISLLRLHRPVVFTRYL 433
R + + V +L + +S E + D R LVQP D+ +LR++ ++ Y
Sbjct: 197 RGLVPIREVRVGDLVVTRHEGDSPEVTHLRRVDQVRKKLVQPKDLVVLRVNDEDIWVTYN 256
Query: 434 QPIRVQSS 457
P+ VQ++
Sbjct: 257 HPLYVQAT 264
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 33.5 bits (73), Expect = 0.16
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 198 CGGSIVHREWVITAAHC 248
CGG+++ +WV+TAAHC
Sbjct: 1266 CGGALIAADWVLTAAHC 1282
>SB_45214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 31.1 bits (67), Expect = 0.84
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 27 LCGQSLSQKVKPYFIEDINKDVDTTNL 107
LCGQ LS+K++PY ++ ++ D T +
Sbjct: 161 LCGQKLSRKIEPYIVQVVDSFKDYTRV 187
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 344 TYDDTRPNLVQPN-DISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASG 505
T + R V P+ D++LLRL P FT Y+ PI + FR G Y +G
Sbjct: 65 TVEGHRARHVPPDYDVALLRLATPAKFTNYVYPICLLPQGARFR--PGKYCYVTG 117
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 383 DISLLRLHRPVVFTRYLQPIRVQSS 457
D +LL+L RP+ FT+Y+QP+ + S
Sbjct: 388 DYALLKLTRPLNFTQYVQPVCLPDS 412
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 198 CGGSIVHREWVITAAHCVADAS 263
C G++V WV+TAA C+ +S
Sbjct: 52 CSGALVSPRWVVTAASCLKQSS 73
>SB_21211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 399 DSIDRSSLPDTSSQFVCNRRLMPSGTTTDSPCMPAVMSSLD 521
+S DR + PDT + F R P TT +SPC P V L+
Sbjct: 361 ESSDRLN-PDTQNDFSPERTASPLDTTENSPC-PTVSDRLE 399
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 198 CGGSIVHREWVITAAHCVADASRW 269
C G+++ V+T+AHCV D+S +
Sbjct: 179 CTGTLISTRHVLTSAHCVHDSSEY 202
>SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24)
Length = 515
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 8/43 (18%)
Frame = +1
Query: 487 HRVCQRSCRLWTNG--------ATPEVLNWVYLRAVANPTCAL 591
H + +CRLWTN A PE+ N ++LR + TC L
Sbjct: 380 HDLLYVNCRLWTNADKIAANKEALPEISNDIHLRVYSLSTCQL 422
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3
Query: 198 CGGSIVHREWVITAAHCV 251
C G+++ R+ V+T+AHCV
Sbjct: 168 CSGTLISRQHVLTSAHCV 185
>SB_54471| Best HMM Match : PHD (HMM E-Value=4.9e-08)
Length = 352
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 519 DEWCYSRGPELGILACCRQPDLRPQLRHPDYAECD-LRQI 635
D WC GPE G + C + H ECD LRQ+
Sbjct: 297 DSWCLCGGPESGEMVACDSQSCEIEWLH---IECDGLRQV 333
>SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29)
Length = 334
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 36 QSLSQKVKPYFIEDINKDVDTTNLRIVSGWEATPGQHPHHAALRMVDPTGG 188
+ + K P +ED + T++ S W PG +PHHA L P GG
Sbjct: 144 EGCANKPHPLGMED--GSIQNTSITASSHW-IEPGHNPHHARLNN-QPVGG 190
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 189 VFACGGSIVHREWVITAAHCVADASRWSFAP 281
V C G+++ VITAAHC+ + +W +P
Sbjct: 150 VMQCSGTLIGPCHVITAAHCIHN-GKWFVSP 179
>SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1299
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 49 KKSSPTSLKISTKM*IPQISVLYLVGRRLPVSTPTTPPS 165
K+S+ SLKI T + + + VG +LP TPP+
Sbjct: 587 KRSALRSLKIGTPETLAPVHIYNRVGPKLPEGATVTPPT 625
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 447 CNRRLMPSGTTTDSPCMPAVMSSLDE 524
C+RR T+ PC P V SS DE
Sbjct: 2659 CDRRFTSKINLTNHPCRPEVQSSSDE 2684
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 447 CNRRLMPSGTTTDSPCMPAVMSSLDE 524
C+RR T+ PC P V SS DE
Sbjct: 3159 CDRRFTSKINLTNHPCRPEVQSSSDE 3184
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 447 CNRRLMPSGTTTDSPCMPAVMSSLDE 524
C+RR T+ PC P V SS DE
Sbjct: 3369 CDRRFTSKINLTNHPCRPEVQSSSDE 3394
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 447 CNRRLMPSGTTTDSPCMPAVMSSLDE 524
C+RR T+ PC P V SS DE
Sbjct: 3789 CDRRFTSKINLTNHPCRPEVQSSSDE 3814
>SB_43681| Best HMM Match : MAM (HMM E-Value=2.5e-20)
Length = 1468
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -3
Query: 621 RIRRNQGAEVEGASRVGDSTQVYPVQDLGS 532
R+ NQGA+ GA R GDS V V D S
Sbjct: 424 RLNNNQGAKEMGAFRNGDSRMVPAVCDFES 453
>SB_31967| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-39)
Length = 409
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = -3
Query: 261 MRRQHSELQ*SPTPCGR*SHRKQTLRRLDPPCGGRR----GGGADRES 130
MRR + EL S PC R + R LRRL G G GA+R S
Sbjct: 349 MRRAYRELYNSACPCARRATRVSALRRLLAEASGYTINIIGVGANRGS 396
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,984,726
Number of Sequences: 59808
Number of extensions: 566645
Number of successful extensions: 1636
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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